Job Description P05459 Confidence 100.00% Date Thu Jan 5 10:58:44 GMT 2012 Rank 11 Aligned Residues 281 % Identity 27% Template c1xdwA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nad+-dependent (r)-2-hydroxyglutarate PDBTitle: nad+-dependent (r)-2-hydroxyglutarate dehydrogenase from2 acidaminococcus fermentans Resolution 1.98 Å

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		1	.	.	.	.					.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.					.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.			60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.																															.	.	.	.																					.					.	.
Query SS confidence							.	.	.	.																															.	.	.	.																					.					.	.
Query Sequence		M	K	I	L	V	.	.	.	.	D	E	N	M	P	Y	A	R	D	L	F	S	R	L	G	E	V	T	A	V	P	G	R	P	I	P	V	A	Q	L	.	.	.	.	A	D	A	D	A	L	M	V	R	S	V	T	K	V	N	E	S	L	L	A	.	G	K	P	I	.	.	K	F	V	G	T	A	T	A	G	T
Query Conservation							.	.	.	.																															.	.	.	.																					.					.	.
Alig confidence							.	.	.	.																															.	.	.	.																					.					.	.
Template Conservation
Template Sequence		M	K	V	L	C	Y	G	V	R	D	V	E	L	P	I	F	E	A	C	N	K	E	F	G	Y	D	I	K	C	V	P	D	Y	L	N	T	K	E	T	A	E	M	A	A	G	F	D	A	V	I	L	R	G	N	C	F	A	N	K	Q	N	L	D	I	Y	K	K	L	G	V	K	Y	I	L	T	R	T	A	G	T
Template Known Secondary structure								S			T	T	T								G	G	G	T								S			S		S						T	T	T	T		S						T	T			B												T							S	S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	H	V	D	E	A	W	L	K	Q	A	G	I	G	F	S	A	A	P	G	C	N	A	I	A	V	V	E	Y	V	F	S	S	L	L	M	L	A	E	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	S	L	Y	D	R	T	V	G	I	V	G	V	G	N	V	G	R	R
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	H	I	D	K	E	Y	A	K	E	L	G	F	P	M	A	F	V	P	R	Y	S	P	N	A	I	A	E	L	A	V	T	Q	A	M	M	L	L	R	H	T	A	Y	T	T	S	R	T	A	K	K	N	F	K	V	D	A	F	M	F	S	K	E	V	R	N	C	T	V	G	V	V	G	L	G	R	I	G	R	V
Template Known Secondary structure		T	T	B								T	T																											T	T									T	T	T						S	T	T					G	G	G	S								S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		L	Q	A	R	L	E	A	L	G	I	K	T	L	L	C	D	P	.	P	R	A	D	R	G	D	E	G	D	F	R	S	L	D	E	L	V	Q	R	A	D	I	L	T	F	H	T	P	L	F	K	D	G	P	Y	K	T	L	H	L	A	D	E	K	L	I	R	S	L	K	P	G	A	I	L	I	N	A	C	R	G
Query Conservation																			.
Alig confidence																			.																																		.	.	.	.
Template Conservation																																																					.	.	.	.
Template Sequence		A	A	Q	I	F	H	G	M	G	A	T	V	I	G	E	D	V	F	E	I	K	G	I	E	D	Y	C	T	Q	V	S	L	D	E	V	L	E	K	S	D	I	I	T	I	H	A	P	Y	I	K	E	.	.	.	.	N	G	A	V	V	T	R	D	F	L	K	K	M	K	D	G	A	I	L	V	N	C	A	R	G
Template Known Secondary structure									T	T								S	S				S		T	T	T														S										T	T	.	.	.	.	T			S	B							T	S		T	T							S		G
Template Predicted Secondary structure																																																					.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.					.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240																.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		A	V	V	D	N	T	A	L	L	T	C	L	N	E	G	Q	K	L	S	V	V	L	D	V	W	E	G	E	P	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	E	L	L	K	K	V	D	.	I	G	T	S	H	I	A	G	Y	T	L	E	G	K	A	R	G	T	T	Q	V	F	E	A
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation
Template Sequence		Q	L	V	D	T	E	A	V	I	E	A	V	E	S	G	K	L	G	G	Y	G	C	D	V	L	D	G	E	A	S	V	F	G	K	D	L	E	G	Q	K	L	E	N	P	L	F	E	K	L	V	D	L	Y	P	R	V	L	I	T	P	H	L	G	S	Y	T	D	E	A	V	K	N	M	V	E	V	S	Y	Q	N
Template Known Secondary structure		G	G	B												T	S							S			T	T	G	G	G	T	T	T				T	T	S			S	S									T	T	T	T						S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	K	F	I	G	H	E	Q	H	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	D	L	A	E	T	G	D	C	P	N
Template Known Secondary structure									S			T	T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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