Job Description P05459 Confidence 97.88% Date Thu Jan 5 10:58:44 GMT 2012 Rank 172 Aligned Residues 129 % Identity 20% Template c1v9lA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: l-glutamate dehydrogenase from pyrobaculum islandicum2 complexed with nad Resolution 2.80 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	C	N	A	I	A	V	V	E	Y	V	F	S	S	L	L	M	L	A	E	R	D	G	F	S	L	Y	D	R	T	V	G	I	V	G	V	G	N	V	G	R	R	L	Q	A	R	L	E	A	L	G	I	K	T	L	L	C	D	P	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	V	R	E	Y	A	T	G	F	G	V	A	V	A	T	R	E	M	A	K	K	L	W	G	G	I	E	G	K	T	V	A	I	Q	G	M	G	N	V	G	R	W	T	A	Y	W	L	E	K	M	G	A	K	V	I	A	V	S	D	I	N	G	V	A	Y	R	K	E	G	L	N	V	E	L	I	Q	K	N	K	G
Template Known Secondary structure		G	G	G	G	G																			S			T	T									S												T	T	T									S	S						T	T				T						T	T	T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
												150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		.	.	.	.	.	.	.	.	.	.	A	D	R	G	D	E	G	D	F	R	S	L	D	E	L	V	Q	.	R	A	D	I	L	T	F	H	T	P	L	F	K	D	G	P	Y	K	T	L	H	L	A	D	E	K	L	I	R	S	L	K	P	G	A	I	L	I	N	A	C	R	G	A	V	V	D	N	T	A	L	L
Query Conservation		.	.	.	.	.	.	.	.	.	.																		.
Alig confidence		.	.	.	.	.	.	.	.	.	.																		.										.	.	.	.	.	.	.	.	.															.													.					.
Template Conservation																																							.	.	.	.	.	.	.	.	.															.													.					.
Template Sequence		L	T	G	P	A	L	V	E	L	F	T	T	K	D	N	A	E	F	V	K	N	P	D	A	I	F	K	L	D	V	D	I	F	V	P	A	A	.	.	.	.	.	.	.	.	.	I	E	N	V	I	R	G	D	N	A	G	L	V	K	.	A	R	L	V	V	E	G	A	N	G	P	T	.	T	P	E	A	.	E
Template Known Secondary structure		S												T	S						S	S	T	T	G	G	G	G				S						S	.	.	.	.	.	.	.	.	.		S	S		B		T	T	T	T	T	T			.		S						S	S	S		B	.					.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.															.													.					.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.										300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.		330
		219	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	C	L	N	E	G	Q	K	L	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	L	Y	E	R	G	V	V	V	V
Template Known Secondary structure						T	T	T
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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