Job Description P05459 Confidence 97.91% Date Thu Jan 5 10:58:44 GMT 2012 Rank 162 Aligned Residues 137 % Identity 17% Template c1ml4A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate transcarbamoylase; PDBTitle: the pala-liganded aspartate transcarbamoylase catalytic subunit from2 pyrococcus abyssi Resolution 1.80 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																.																																					.	.	.
Query SS confidence																.																																					.	.	.
Query Sequence		A	W	L	K	Q	A	G	I	G	F	S	A	A	P	.	G	C	N	A	I	A	V	V	E	Y	V	F	S	S	L	L	M	L	A	E	R	D	G	F	S	L	Y	D	R	T	V	G	I	V	G	V	.	.	.	G	N	V	G	R	R	L	Q	A	R	L	E	A	L	G	I	K	T	L	L	C	D	P	P	R	A
Query Conservation																.																																					.	.	.
Alig confidence																.									.	.														.													.	.	.
Template Conservation																									.	.														.
Template Sequence		L	A	A	E	V	A	E	V	P	V	I	N	A	G	D	G	S	N	Q	H	P	T	Q	.	.	T	L	L	D	L	Y	T	I	K	K	E	F	G	.	R	I	D	G	L	K	I	G	L	L	G	D	L	K	Y	G	R	T	V	H	S	L	A	E	A	L	T	F	Y	D	V	E	L	Y	L	I	S	P	E	L	L
Template Known Secondary structure						T		S	S								T	T	S						.	.												S	S	.		S	S	S							S		T	T	T											G	G	G	S										G	G	G
Template Predicted Secondary structure																									.	.														.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		151	.	.													.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.									.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.																											.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.																											.
Query Sequence		D	R	G	.	.	.	.	.	.	.	.	.	.	.	.	D	E	G	D	F	R	S	L	D	E	L	V	Q	R	A	D	I	L	T	F	H	T	P	L	F	K	D	G	.	.	.	.	.	.	.	.	P	Y	K	T	L	H	L	A	D	E	K	L	I	R	S	L	K	P	G	A	I	L	I	N	A	C	.	R	G
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.																											.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.																					.								.	.	.	.	.	.	.	.																											.
Template Conservation																																					.
Template Sequence		R	M	P	R	H	I	V	E	E	L	R	E	K	G	M	K	V	V	E	T	T	T	L	E	D	V	I	G	K	L	D	V	L	Y	V	.	T	R	I	Q	K	E	R	F	P	D	E	Q	E	Y	L	K	V	K	G	S	Y	Q	V	N	L	K	V	L	E	K	A	K	D	E	L	R	I	M	H	P	L	P	R	V
Template Known Secondary structure														T	T							S		T					T	T		S					.					G	G	G	S	S	S						T	T	T	T				B		T	T	G	G	G	G	S		T	T							S			S
Template Predicted Secondary structure																																					.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	V	D	N	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	I	H	P	E
Template Known Secondary structure		S	S	B		G	G
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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