Job Description P05459 Confidence 96.20% Date Thu Jan 5 10:58:44 GMT 2012 Rank 356 Aligned Residues 82 % Identity 21% Template c1ldbA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:apo-l-lactate dehydrogenase; PDBTitle: structure determination and refinement of bacillus2 stearothermophilus lactate dehydrogenase Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.														.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	D	R	T	V	G	I	V	G	V	G	N	V	G	R	R	L	Q	A	R	L	E	A	L	G	I	.	.	K	T	L	L	C	D	P	P	R	A	D	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	G	D	F	R	S	L	D	E	L	V	Q	R	A	D	I	L	T	F	H	T	P	L	F	K
Query Conservation																												.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.														.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		G	G	A	R	V	V	V	I	G	A	G	F	V	G	A	S	Y	V	F	A	L	M	N	Q	G	I	A	D	E	I	V	L	I	D	A	N	E	S	K	A	I	G	D	A	M	D	F	N	H	G	K	V	F	A	P	K	P	V	D	I	W	D	Y	D	D	C	R	D	A	D	L	V	V	I	.	.	.	.	.	.
Template Known Secondary structure			S	S								S												T	T	T			S							S	S															G	G	G	T	T								G	G	G		S	S		S					.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		180	.	.	.	.	.	.	.	.	.	190													.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	G	P	Y	K	T	L	H	L	A	D	.	.	.	.	.	.	.	.	.	.	.	.	E	K	L	I	R	S	L	K	P	G	A	I	L	I	N	A	C
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	C	A	G	A	N	D	L	V	D	K	N	I	A	I	F	R	S	I	V	E	S	V	M	A	S	G	F	Q	G	L	F	L	V	A	T
Template Known Secondary structure		.	.	.	.	.																									T	T			S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions