Job Description P05459 Confidence 96.81% Date Thu Jan 5 10:58:44 GMT 2012
Rank 297 Aligned Residues 90
% Identity 21% Template c1hyhA_
PDB info
PDB header: oxidoreductase (choh(d)-nad+(a))Chain: A: PDB Molecule: l-2-hydroxyisocaproate dehydrogenase;
PDBTitle: crystal structure of l-2-hydroxyisocaproate dehydrogenase from2 lactobacillus confusus at 2.2 angstroms resolution-an example of3 strong asymmetry between subunits
Resolution 2.20 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
117 . . 120 . . . . . . . . . 130 . . . . . . . . . 140
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Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
R T V G I V G V G N V G R R L Q A R L E A L G I .
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K T L L C D P P R A D R G .
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D E G D F R S L D E L V Q R A D I L T F H T P L F K
Query Conservation  
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Alig confidence  
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Template Conservation  
                                                                                                   
Template Sequence  
R K I G I I G L G N V G A A V A H G L I A Q G V A D D Y V F I D A N E A K V K A D Q I D F Q D A M A N L E A H G N I V I N D W A A L A D A D V V I S T L G N I K
Template Known Secondary structure  
S T S S S G G G S S S S G G G G T T S S G G
Template Predicted Secondary structure  
Template SS confidence  
   
22 . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 .
 
   
180 . . . . . . . . . 190 . . . . . . .
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Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
D G P Y K T L H L A D E K L I R S L .
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K P G A I L I N A C
Query Conservation  
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Alig confidence  
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Template Conservation  
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Template Sequence  
L Q Q F .
A E L K F T S S M V Q S V G T N L K E S G F H G V L V V I S
Template Known Secondary structure  
G T . T T T T S S
Template Predicted Secondary structure  
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Template SS confidence  
   
102 . . .
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]