Job Description P05459 Confidence 97.67% Date Thu Jan 5 10:58:44 GMT 2012 Rank 199 Aligned Residues 131 % Identity 19% Template c1hrdA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: glutamate dehydrogenase Resolution 1.96 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	C	N	A	I	A	V	V	E	Y	V	F	S	S	L	L	M	L	A	E	R	D	G	F	S	L	Y	D	R	T	V	G	I	V	G	V	G	N	V	G	R	R	L	Q	A	R	L	E	A	L	G	I	K	T	L	L	C	D	P	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	R	P	E	A	T	G	Y	G	S	V	Y	Y	V	E	A	V	M	K	H	E	N	D	T	L	V	G	K	T	V	A	L	A	G	F	G	N	V	A	W	G	A	A	K	K	L	A	E	L	G	A	K	A	V	T	L	S	G	P	D	G	Y	I	Y	D	P	E	G	I	T	T	E	E	K	I	N	Y	M	L
Template Known Secondary structure		T	T	T	T	T																	T	T			S	T	T									S													T	T									T	T						T	T		S		S
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
														150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																		.																																			.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																		.																																			.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	A	D	R	G	D	E	G	D	F	R	S	L	D	E	L	V	Q	.	R	A	D	I	L	T	F	H	T	P	L	F	K	D	G	P	Y	K	T	L	H	L	A	D	E	K	L	I	R	S	L	K	P	G	.	.	A	I	L	I	N	A	C	R	G	A	V	V	D	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																		.																																			.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																		.										.	.	.	.	.	.	.	.	.																	.	.											.
Template Conservation																																									.	.	.	.	.	.	.	.	.																													.
Template Sequence		E	M	R	A	S	G	R	N	K	V	Q	D	Y	A	D	K	F	G	V	Q	F	F	P	G	E	K	P	W	G	Q	K	V	D	I	I	M	P	C	A	.	.	.	.	.	.	.	.	.	T	Q	N	D	V	D	L	E	Q	A	K	K	I	V	A	N	N	V	K	Y	Y	I	E	V	A	N	M	P	.	T	T	N
Template Known Secondary structure							S				T								T						T			S	T	T	S			S						S	.	.	.	.	.	.	.	.	.		T	T		B											T	T								S	S	S		.	B
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.																													.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.										.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	L	L	T	C	L	N	E	G	Q	K	L	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	L	R	F	L	M	Q	Q	P	N	M	V	V	A
Template Known Secondary structure											T	T
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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