Job Description P76242 Confidence 2.74% Date Thu Jan 5 12:21:06 GMT 2012 Rank 46 Aligned Residues 186 % Identity 14% Template c3b9yA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein Resolution 1.85 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	M	I	A	T	T	L	R	V	T	F	T	G	A	A	P	L	L	D	T	I	R	S	A	Y	S	L	T	T	A	Q	T	G	L	L	T	T	L	P	L	L	A	F	A	L	I	S	P	L	A	A	P	V	A	R	R	F	G	M	E	R	S	L	F	A	A	L	L	L	I	C	A	G	I	A	I	R	S	L
Query Conservation
Alig confidence																				.	.	.	.	.																																			.	.
Template Conservation																				.	.	.	.	.																																			.	.
Template Sequence		S	M	L	G	S	M	V	L	W	L	F	W	P	S	F	A	T	A	.	.	.	.	.	I	V	P	F	E	Q	M	P	Q	T	I	V	N	T	L	L	A	L	C	G	A	T	L	A	T	Y	F	L	S	A	L	F	H	K	.	.	G	K	A	S	I	V	D	M	A	N	A	A	L	A	G	G	V	A	I	G	S
Template Known Secondary structure																			T	.	.	.	.	.	T	S		G	G	G																											T	T	.	.	T											T	T							T	T
Template Predicted Secondary structure																				.	.	.	.	.																																			.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.						.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.						.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																														.	.	.	.	.
Query SS confidence																														.	.	.	.	.
Query Sequence		P	S	P	Y	L	L	F	G	G	T	A	V	I	G	G	G	I	A	L	G	N	V	L	L	P	G	L	I	.	.	.	.	.	K	R	D	F	P	H	S	V	A	R	L	T	G	A	Y	S	L	T	M	G	A	A	A	A	L	G	S	A	M	V	V	P	L	A	L	N	G	F	G	W	Q	G	A	L	L	M	L
Query Conservation																														.	.	.	.	.
Alig confidence																														.	.	.	.	.
Template Conservation
Template Sequence		V	C	N	I	V	G	P	V	G	A	F	V	I	G	L	L	G	G	A	I	S	V	V	G	F	V	F	I	Q	P	M	L	E	S	K	A	K	T	I	D	T	C	G	V	H	N	L	H	G	L	P	G	L	L	G	G	F	S	A	I	L	I	V	P	G	I	A	V	A	Q	L	T	G	I	G	I	T	L	A	L
Template Known Secondary structure		T	T	T	T	S																						T									S					T	T						T	T														S	T	T
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	C	F	P	L	L	A	L	F	L	W	L	P	Q	W	R	S	Q	Q	H	A	N	L	S	T	S	R	A	L	H	T	R	G	I	W	R	S	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	I	G	G	V	I	A	G	A	L	I	K	L	T	G	T	T	K	Q	A	Y	E	D	S	H	E	F	I	H	L	A	G	P	E	D	E	H
Template Known Secondary structure															T	T				S	S	T	T		G	G	G	T	S	S	S				G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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