Return to main results Retrieve Phyre Job Id

Job DescriptionP08390
Confidence100.00%DateThu Jan 5 11:01:25 GMT 2012
Rank18Aligned Residues187
% Identity35%Templated2hjsa2
SCOP infoFwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain GAPDH-like
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132. ......140.........150.........160.........170.........180.........190.........200.... ....
Predicted Secondary structure  .






























..



Query SS confidence 

.






































































. .



Query Sequence  SL. TSQLLAALKPLIDQGGLSRISVTSLISASAQGKKAVDALAGQSAKLLNGIPIDEEDFFGRQLAFNMLPLLP. . DSEG
Query Conservation 
 . 
   
 
 

     
  
 
 
   




      
                      
  
  
   ..    
Alig confidence 

.



















































.

















..



Template Conservation 

 
  
  

 

     
  
 
 
   




   
 

  

         .        



  
 

    
 
Template Sequence  CAVAAELCEVLAPLLATLDCRQLNLTACLSVSSLGREGVKELARQTAELLNARPL. EPRLFDRQIAFNLLAQVGAVDAEG
Template Known Secondary structure 
TTT


GGGG
TT


.

SSSSS

TT

BSSSS
B
TTS
Template Predicted Secondary structure 



















.





















Template SS confidence 















































































   130.........140.........150.........160.........170.........180.... .....190.........200........
 
   209210.........220.........230.........240.........250.........260.........270.........280........
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  SVREERRIVDEVRKILQDEGLMISASVVQAPVFYGHAQMVNFEALRPLAAEEARDAFVQGEDIVLSEENEFPTQVGDASG
Query Conservation     

     
   

      

 
   


 

   

 
        
 
         
        
     
 
Alig confidence 















































































Template Conservation 
  

 

  
  

       
  
 
 


 

   

 
          
       
 
 
      
     
 
Template Sequence  HSAIERRIFAEVQALLGERIGPLNVTCIQAPVFFGDSLSVTLQCAEPVDLAAVTRVLDATKGIEWVGEGDYPTVVGDALG
Template Known Secondary structure 
BTGGGB


S
SS
SS


STT

TT








TT
Template Predicted Secondary structure 



























Template SS confidence 















































































   209210.........220.........230.........240.........250.........260.........270.........280........
 
   289290.........300.........310.........
Predicted Secondary structure 











Query SS confidence 






























Query Sequence  TPHLSVGCVRNDYGMPEQVQFWSVADNVRFG
Query Conservation       

                  


 

Alig confidence 






























Template Conservation   
   




        
 
    


 

Template Sequence  QDETYVGRVRAGQADPCQVNLWIVSDNVRKG
Template Known Secondary structure  SS

SS
TT
TTTT
Template Predicted Secondary structure 











Template SS confidence 






























   289290.........300.........310.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions