Return to main results Retrieve Phyre Job Id

Job DescriptionP08390
Confidence95.72%DateThu Jan 5 11:01:25 GMT 2012
Rank387Aligned Residues143
% Identity24%Templated1wdka3
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase-like, N-terminal domain
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50. ........60....
Predicted Secondary structure 
















.....................












Query SS confidence 













































. . . . . . . . . . . . . . . . . . . . .












Query Sequence  NIAVLGATGAVGEALLETLAERQFPVGEIYALARNESAGEQLRFGG. . . . . . . . . . . . . . . . . . . . . KTITVQDAAEFDW
Query Conservation   







  
 





  
  
   
    
    

      .....................             
Alig confidence 






.













...




















.....................












Template Conservation   
 


 .
  
  

  

  ...
  
   
                                               
Template Sequence  QAAVLGA. GIMGGGIAYQSASK. . . GTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDF
Template Known Secondary structure  S

.T...T


SSTTTSS
SSSTTG
Template Predicted Secondary structure 

.

...













Template SS confidence 















































































   316...320.. .......330...... ...340.........350.........360.........370.........380.........390.
 
   65....70....... ..80.........90.........100.. .......110.........120.........130.
Predicted Secondary structure 






.....









........

















Query SS confidence 












. . . . .
























. . . . . . . .




























Query Sequence  TQAQLAFFVAGKE. . . . . ATAAWVEEATNSGCLVIDSSGLFAL. . . . . . . . EPDVPLVVPEVNPFVLTDYRNRNVIAVPD
Query Conservation     



 
 
  ..... 
          
  




 


 ........       




           





Alig confidence 












.....
























........




















..





Template Conservation     
 

  
                      

 
 
                         
       
..
     
Template Sequence  GNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVE. . VIRGEK
Template Known Secondary structure  GG
S


S
TTS
TT


SSS
GGG
S
GGG

SSTTT

..
SS
Template Predicted Secondary structure 






























..


Template SS confidence 















































































   392.......400.........410.........420.........430.........440.........450.........460... ......
 
   132.......140.........150.....
Predicted Secondary structure 




Query SS confidence 























Query Sequence  SLTSQLLAALKPLIDQGGLSRISV
Query Conservation 
  
   
 
 

     
  
 
Alig confidence 




.

















Template Conservation 
  
 .   
  
    
   
 
Template Sequence  SSDLA. VATTVAYAKKMGKNPIVV
Template Known Secondary structure 

.TT
Template Predicted Secondary structure 

.


Template SS confidence 























   470.... .....480.........490..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions