Job Description P08390 Confidence 100.00% Date Thu Jan 5 11:01:25 GMT 2012 Rank 8 Aligned Residues 329 % Identity 22% Template c3uw3A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: crystal structure of an aspartate-semialdehyde dehydrogenase from2 burkholderia thailandensis Resolution 1.55 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																											.																																				.
Query SS confidence																											.																																				.
Query Sequence		G	W	N	I	A	V	L	G	A	T	G	A	V	G	E	A	L	L	E	T	L	A	E	R	Q	.	F	P	V	G	E	I	Y	A	L	A	R	N	E	S	A	G	E	Q	L	R	F	G	G	K	T	I	T	V	Q	D	A	A	E	F	D	.	W	T	Q	A	Q	L	A	F	F	V	A	G	K	E	A	T	A	A
Query Conservation																											.																																				.
Alig confidence																											.																																				.
Template Conservation
Template Sequence		S	M	N	V	G	L	V	G	W	R	G	M	V	G	S	V	L	M	Q	R	M	Q	E	E	G	D	F	D	L	I	E	P	V	F	F	S	T	S	N	A	G	G	K	A	P	S	F	A	K	N	E	T	T	L	K	D	A	T	S	I	D	D	L	K	K	C	D	V	I	I	T	C	Q	G	G	D	Y	T	N	D
Template Known Secondary structure									S	T	T	S													T	T	G	G	G	G	S							S	S		T	T	S	B			T	T			S			B				T	T							T		S						S
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure													.	.																										.	.
Query SS confidence													.	.																										.	.
Query Sequence		W	V	E	E	A	T	N	S	G	C	L	.	.	V	I	D	S	S	G	L	F	A	L	E	P	D	V	P	L	V	V	P	E	V	N	P	F	V	.	.	L	T	D	Y	R	N	R	N	V	I	A	V	P	D	S	L	T	S	Q	L	L	A	A	L	K	P	L	I	D	Q	G	G	L	S	R	I	S	V	T	S
Query Conservation													.	.																										.	.
Alig confidence													.	.																										.	.
Template Conservation
Template Sequence		V	F	P	K	L	R	A	A	G	W	N	G	Y	W	I	D	A	A	S	S	L	R	M	K	D	D	A	V	I	I	L	D	P	V	N	L	N	V	I	K	D	A	L	V	N	G	T	K	N	F	I	G	G	N	C	T	V	S	L	M	L	M	A	L	G	G	L	F	R	E	N	L	V	D	W	M	T	A	M	T
Template Known Secondary structure									T	T			S						S	S	T	T	T	T		T	T																			T	T																								T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.																										180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Query Sequence		L	I	S	A	S	A	Q	G	K	K	A	V	D	A	L	A	G	Q	S	A	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	G	I	P	I	D	E	E	D	F	F	G	R	Q	L	A	F	N	M	L	P	L	L	P	D	.	.	S	E	G	S	V
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.																				.	.
Template Conservation																																																							.
Template Sequence		Y	Q	A	A	S	G	A	G	A	Q	N	M	R	E	L	L	A	Q	M	G	T	L	N	G	A	V	A	A	Q	L	A	D	P	A	S	A	I	L	D	I	D	R	R	V	L	A	A	M	N	G	D	A	M	.	P	T	S	Q	F	G	V	P	L	A	G	S	L	I	P	W	I	D	K	D	L	G	N	G	M	S
Template Known Secondary structure			B		G	G	G	T																		T	T					T		T	T	S															S	T	T	S	.			T	T	T	S	S			T	T	S		B	S			S		B		S	S	S		B
Template Predicted Secondary structure																																																							.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.							230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.					.
Predicted Secondary structure																					.	.	.	.	.	.																																							.												.	.	.	.
Query SS confidence																					.	.	.	.	.	.																																							.												.	.	.	.
Query Sequence		R	E	E	R	R	I	V	D	E	V	R	K	I	L	Q	D	E	G	L	.	.	.	.	.	.	M	I	S	A	S	V	V	Q	A	P	V	F	Y	G	H	A	Q	M	V	N	F	E	A	L	R	P	L	A	A	E	E	A	R	D	A	F	V	Q	.	G	E	D	I	V	L	S	E	E	N	E	.	.	.	.	F
Query Conservation																					.	.	.	.	.	.																																							.												.	.	.	.
Alig confidence																					.	.	.	.	.	.																																							.												.	.	.	.
Template Conservation
Template Sequence		R	E	E	W	K	G	G	A	E	T	N	K	I	L	G	K	P	A	M	G	E	P	G	S	V	P	V	D	G	L	C	V	R	I	G	A	M	R	C	H	S	Q	A	L	T	I	K	L	K	K	D	V	P	L	D	E	I	N	G	I	L	A	S	A	N	D	W	V	K	V	V	P	N	E	R	E	A	S	M	R
Template Known Secondary structure																T				T	T	S	T	T										B		S		S	S											S	S													T	S		S	S						S	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	Q	V	G	D	A	S	G	T	P	H	L	S	V	G	C	V	R	N	D	Y	G	M	P	E	Q	V	Q	F	W	S	V	A	D	N	V	R	F	G	G	A	L	M	A	V	K	I	A	E	K	L	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	S	P	A	K	V	T	G	T	L	S	V	P	V	G	R	L	R	K	L	A	M	G	G	E	Y	L	S	A	F	T	V	G	D	Q	L	L	W	G	A	A	E	P	L	R	R	M	L	R	I	L	L	D
Template Known Secondary structure			S	S					T	T	S	S											T	T		T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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