Phyre 2 alignment of P08390 with c3rfxB

Job Description P08390
Confidence 94.88% Date Thu Jan 5 11:01:25 GMT 2012

Rank 450 Aligned Residues 69

% Identity 16% Template c3rfxB_

PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:uronate dehydrogenase; PDBTitle: crystal structure of uronate dehydrogenase from agrobacterium2 tumefaciens, y136a mutant complexed with nad

Resolution 1.90 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence	M	S	E	G	W	N	I	A	V	L	G	A	T	G	A	V	G	E	A	L	L	E	T	L	A	E	R	Q	F	P	V	G	E	I	Y	A	L	A	R	N	E	S	A	G	E	Q	.	.	L	R	F	G	G	K	T	I	T	V	Q	D	A	A	E	F	D	W	T	Q	A	Q	L	A	F	F	V	A	G
Query Conservation																																															.	.
Alig confidence			.	.	.																							.	.	.																	.	.
Template Conservation			.	.	.																							.	.	.
Template Sequence	M	K	.	.	.	R	L	L	V	T	G	A	A	G	Q	L	G	R	V	M	R	E	R	L	A	P	M	.	.	.	A	E	I	L	R	L	A	D	L	S	P	L	D	P	A	G	P	N	E	E	C	V	Q	C	D	L	A	D	A	N	A	V	N	A	M	V	A	G	C	D	G	I	V	H	L	G	G
Template Known Secondary structure			.	.	.						S	T	T	S										T	G	G	G	.	.	.									S	S							T	T								T	T										T	T		S							S
Template Predicted Secondary structure			.	.	.																							.	.	.
Template SS confidence
	3	.				.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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