Job Description P08390 Confidence 100.00% Date Thu Jan 5 11:01:25 GMT 2012 Rank 15 Aligned Residues 297 % Identity 26% Template c3hskB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: crystal structure of aspartate semialdehyde dehydrogenase2 with nadp from candida albicans Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.														.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																							.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	E	G	W	N	I	A	V	L	G	A	T	G	A	V	G	E	A	L	L	E	T	L	A	E	R	Q	F	P	V	G	E	I	Y	A	L	.	A	R	N	E	S	A	G	E	Q	L	R	F	G	G	K	T	I	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	A	A	E	F	D	W	T	Q
Query Conservation																																							.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.																							.	.									.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.																							.	.
Template Sequence		V	K	.	.	.	K	A	G	V	L	G	A	T	G	S	V	G	Q	R	F	I	L	L	L	S	K	H	.	.	P	E	F	E	I	H	A	L	G	A	S	S	R	S	A	G	K	K	Y	K	D	A	A	S	W	K	Q	T	E	T	L	P	E	T	E	Q	D	I	V	V	Q	E	C	K	P	E	G	N	F	L	E
Template Known Secondary structure				.	.	.						T	T	T	S												T		.	.	T	T										T	T	T	T	T	S	B										S	S								T		B				S	S	S	S	S	G	G	G	G
Template Predicted Secondary structure				.	.	.																							.	.
Template SS confidence
		3	.				.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.														.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	L	A	F	F	V	A	G	K	E	A	T	A	A	W	V	E	E	A	T	N	S	G	C	L	V	I	D	S	S	G	L	F	A	L	E	P	D	V	P	L	V	V	P	E	V	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	L	T	D	Y	R	N	R	N	V	I	A	V	P	D	S	L
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	D	V	V	F	S	G	L	D	A	D	V	A	G	D	I	E	K	S	F	V	E	A	G	L	A	V	V	S	N	A	K	N	Y	R	R	E	K	D	V	P	L	V	V	P	I	V	N	P	E	H	I	D	V	V	E	N	K	V	K	Q	A	V	S	K	G	G	K	K	P	G	F	I	I	C	I	S	N	C	S
Template Known Secondary structure			S																					T	T							S	S	T	T	T	T		T	T	S					T	T	T		G	G	G	G														T	S	S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		T	S	Q	L	L	A	A	L	K	P	L	I	D	Q	.	G	G	L	S	R	I	S	V	T	S	L	I	S	A	S	A	Q	G	K	K	A	V	D	A	L	A	G	Q	S	A	K	L	L	N	G	I	P	I	D	E	E	D	F	F	G	R	Q	L	A	F	N	M	L	P	L	L	P	D	S	E	G	S	V	R	E
Query Conservation																.
Alig confidence																.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Template Sequence		T	A	G	L	V	A	P	L	K	P	L	V	E	K	F	G	P	I	D	A	L	T	T	T	T	L	Q	A	I	S	P	G	V	S	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	L	D	N	I	V	P	Y	I	.	.	.	.	.	.	S	G	E
Template Known Secondary structure							T	T																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T			B				.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.																										.	.	.	.	.	.	200	.	.	.							.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.														.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.																.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.																.	.	.	.	.	.	.	.	.	.
Query Sequence		E	R	R	I	V	D	E	V	R	K	I	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	G	L	M	I	S	A	S	V	V	Q	A	P	V	F	Y	G	H	A	Q	M	V	N	F	E	A	.	.	L	R	P	L	A	A	E	E	A	R	D	A	F	V	Q	.	.	.	.	.	.	.	.	.	.
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.																.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	D	K	L	E	W	E	T	K	K	I	L	G	G	V	N	A	E	G	T	E	F	V	P	I	P	E	S	E	M	K	V	S	A	Q	C	N	R	V	P	V	I	D	G	H	T	E	C	I	S	L	R	F	A	N	R	P	A	P	S	V	E	D	V	K	Q	C	L	R	E	Y	E	C	A	A	S	K	L	G	C
Template Known Secondary structure													T					T	T	S	S	S						T	T	T											S		S	S											S	S	S	S																						T
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
						268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.				.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																											.	.	.
Query SS confidence		.	.	.	.																											.	.	.
Query Sequence		.	.	.	.	G	E	D	I	V	L	S	E	E	N	E	F	P	T	Q	V	G	D	A	S	G	T	P	H	L	S	.	.	.	V	G	C	V	R	N	D	Y	G	M	P	E	Q	V	Q	F	W	S	V	A	D	N	V	R	F	G	G	A	L	M	A	V	K	I	A	E	K	L	V	Q	E	Y	L
Query Conservation		.	.	.	.																											.	.	.
Alig confidence		.	.	.	.																.											.	.	.								.	.
Template Conservation																					.																					.	.
Template Sequence		H	S	A	P	K	Q	T	I	H	V	L	D	Q	P	D	R	P	Q	P	.	R	L	D	R	D	R	D	S	G	Y	G	V	S	V	G	R	I	R	E	D	.	.	S	L	L	D	F	K	M	V	V	L	S	H	N	T	I	I	G	A	A	G	A	G	I	L	I	A	E	I	L	K	A	K	N	I
Template Known Secondary structure		S	S	S		S	S							S	T	T					.				T	T	T	T	T	T	S	S										.	.	S	S	S	S													S															T	T
Template Predicted Secondary structure																					.																					.	.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330			.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions