Return to main results Retrieve Phyre Job Id

Job DescriptionP08390
Confidence96.88%DateThu Jan 5 11:01:25 GMT 2012
Rank254Aligned Residues101
% Identity19%Templatec3ew7A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:lmo0794 protein; PDBTitle: crystal structure of the lmo0794 protein from listeria2 monocytogenes. northeast structural genomics consortium3 target lmr162.
Resolution2.73 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60... ......70......
Predicted Secondary structure 




























..







......
Query SS confidence 


























































. .












. . . . . .
Query Sequence  WNIAVLGATGAVGEALLETLAERQFPVGEIYALARNESAGEQLRFGGKTITVQDAAEFD. . WTQAQLAFFVAGK. . . . . .
Query Conservation    







  
 





  
  
   
    
    

                  ..    



 
 
 ......
Alig confidence 
























...






























..












......
Template Conservation   



 



 

  
   
   
 ... 
    
                                             
Template Sequence  XKIGIIGATGRAGSRILEEAKNRGH. . . EVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAE
Template Known Secondary structure 
TTTSTT
...S
S
SSS

GGG

TT
S


SSTTTTT
Template Predicted Secondary structure 







...

























Template SS confidence 















































































   1........10.........20..... ....30.........40.........50.........60.........70.......
 
   77..80.........90 .........100........
Predicted Secondary structure  ...

.












Query SS confidence  . . .













.

















Query Sequence  . . . EATAAWVEEATNSG. CLVIDSSGLFALEPDVPL
Query Conservation  ...  
          
.  




 


       
Alig confidence  ...













.

















Template Conservation             
    

 
 
  
           
Template Sequence  KHVTSLDHLISVLNGTVSPRLLVVGGAAAPYYPTAR
Template Known Secondary structure  S
S

SS






S

Template Predicted Secondary structure 













Template SS confidence 



































   78.80.........90.........100.........110...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions