Job Description P08390 Confidence 95.20% Date Thu Jan 5 11:01:25 GMT 2012 Rank 430 Aligned Residues 128 % Identity 13% Template c3cmmA_ PDB info PDB header:ligase/protein binding Chain: A: PDB Molecule:ubiquitin-activating enzyme e1 1; PDBTitle: crystal structure of the uba1-ubiquitin complex Resolution 2.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.	.	.	.	.																.	40	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	G	W	N	I	A	V	L	G	A	T	G	A	V	G	E	A	L	L	E	T	L	A	E	R	Q	F	.	.	.	P	V	G	E	I	Y	A	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	E	S	A	G	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																													.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		A	N	S	K	V	F	L	V	G	S	.	G	A	I	G	C	E	M	L	K	N	W	A	L	L	G	L	G	S	G	S	D	G	Y	I	V	V	T	D	N	D	S	I	E	K	S	N	L	N	R	Q	F	L	F	R	P	K	D	V	G	K	N	K	S	E	V	A	A	E	A	V	C	A	M	N	P	D	L	K	G
Template Known Secondary structure			T									.	S														T	T	T		S	T	T										B			G	G	G	T	T	T		T	T			G	G	G	T	T	S	B														G	G	G	T	T
Template Predicted Secondary structure												.
Template SS confidence
		433	.	.	.	.	.	.	440	.	.		.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
						47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure		.	.	.	.																																									.
Query SS confidence		.	.	.	.																																									.
Query Sequence		.	.	.	.	L	R	F	G	G	K	T	I	T	V	Q	D	A	A	E	F	D	W	T	Q	A	Q	L	A	F	F	V	A	G	K	E	A	T	A	A	W	V	E	E	A	.	T	N	S	G	C	L	V	I	D	S	S	G	L	F	A	L	E	P	D	V	P	L	V	V	P	E	V	N	P	F	V	L	T	D	Y
Query Conservation		.	.	.	.																																									.
Alig confidence		.	.	.	.																																									.										.
Template Conservation																																																								.
Template Sequence		K	I	N	A	K	I	D	K	V	G	P	E	T	E	E	I	F	N	D	S	F	W	E	S	L	D	F	V	T	N	A	L	D	N	V	D	A	R	T	Y	V	D	R	R	C	V	F	Y	R	K	P	L	L	E	.	S	G	T	L	G	T	K	G	N	T	Q	V	I	I	P	R	L	T	E	S	Y	S	S	S	R
Template Known Secondary structure		T									S	G	G	G	T	T	T	S									S							S	S															T						.					T	T									T	T	T	B			G	G	G	S
Template Predicted Secondary structure																																																								.
Template SS confidence
		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.		.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590
		122	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	R	N	V	I	A	V	P	D	S	L
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		D	P	P	E	.	K	S	I	P	L	C	T
Template Known Secondary structure						.
Template Predicted Secondary structure						.
Template SS confidence
		591	.	.	.		.	.	.	.	.	600	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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