Return to main results Retrieve Phyre Job Id

Job DescriptionP08390
Confidence96.84%DateThu Jan 5 11:01:25 GMT 2012
Rank261Aligned Residues89
% Identity18%Templatec3ckyA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:2-hydroxymethyl glutarate dehydrogenase; PDBTitle: structural and kinetic properties of a beta-hydroxyacid dehydrogenase2 involved in nicotinate fermentation
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  GWNIAVLGATGAVGEALLETLAERQFPVGEIYALARNESAGEQLRFGGKTITVQDAAEFDWTQAQLAFFVAGKEATAAWV
Query Conservation     







  
 





  
  
   
    
    

                      



 
 
   
    
Alig confidence 








.


















.....













































Template Conservation   


 


 .
 

  

  
   
  
 .....  
        
   
     
  
    

 
 
 
         
Template Sequence  SIKIGFIGL. GAMGKPMAINLLKEGVTVY. . . . . AFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETV
Template Known Secondary structure 



.
TTTT
.....
SSTTT

SS
S

SS
Template Predicted Secondary structure 



.



.....













Template SS confidence 















































































   4.....10.. .......20.........30. ........40.........50.........60.........70.......
 
   84.....90........
Predicted Secondary structure  .......





Query SS confidence  . . . . . . .














Query Sequence  . . . . . . . EEATNSGCLVIDSSG
Query Conservation  .......      
  




 
Alig confidence  .......














Template Conservation                  
   

Template Sequence  MNGPGGVLSACKAGTVIVDMSS
Template Known Secondary structure  STT
S
TT



Template Predicted Secondary structure 







Template SS confidence 





















   78.80.........90.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions