Return to main results Retrieve Phyre Job Id

Job DescriptionP08390
Confidence100.00%DateThu Jan 5 11:01:25 GMT 2012
Rank5Aligned Residues324
% Identity35%Templatec2yv3B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: crystal structure of aspartate semialdehyde dehydrogenase from thermus2 thermophilus hb8
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  WNIAVLGATGAVGEALLETLAERQFPVGEIYALARNESAGEQLRFGGKTITVQDAAEFDWTQAQLAFFVAGKEATAAWVE
Query Conservation    







  
 





  
  
   
    
    

                      



 
 
   
     
Alig confidence 
























































.





















Template Conservation 
 
 





  
 





     
   
    
    

        
 
     .     



 
 
   
     
Template Sequence  MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLAFRGEEIPVEPLPE. GPLPVDLVLASAGGGISRAKAL
Template Known Secondary structure 
TTTSTT




GGGSS
TT

S.S

S
S
S
S
Template Predicted Secondary structure 
























.











Template SS confidence 















































































   1........10.........20.........30.........40.........50....... ..60.........70.........
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  EATNSGCLVIDSSGLFALEPDVPLVVPEVNPFVLTDYRNRNVIAVPDSLTSQLLAALKPLIDQGGLSRISVTSLISASAQ
Query Conservation       
  




 


        




           






  
   
 
 

     
  
 
 
   



Alig confidence 


































..










































Template Conservation       
  




   
         



   
 ..     

 


  
   
 
 

     
  
 
 
  




Template Sequence  VWAEGGALVVDNSSAWRYEPWVPLVVPEVNREKIF. . QHRGIIANPNCTTAILAMALWPLHRAFQAKRVIVATYQAASGA
Template Known Secondary structure  TT

STTTTT
TTS
B

GGGGG..G
SS


TTT


B
GGGT
Template Predicted Secondary structure 



















..
















Template SS confidence 















































































   80.........90.........100.........110.... .....120.........130.........140.........150.......
 
   165....170.........180.........190.........200.... .....210.........220.........230.........240..
Predicted Secondary structure 




















..














Query SS confidence 







































. .





































Query Sequence  GKKAVDALAGQSAKLLNGIPIDEEDFFGRQLAFNMLPLLP. . DSEGSVREERRIVDEVRKILQDEGLMISASVVQAPVFY
Query Conservation 
      
                      
  
  
   ..       

     
   

      

 
   


 
Alig confidence 




















.

















..





































Template Conservation 
      
             .           
 

 

         

     
   

      
  
   


 
Template Sequence  GAKAMEELLTETHRFLHGEAP. KAEAFAHPLPFNVIPHIDAFQENGYTREEMKVVWETHKIFGDDTIRISATAVRVPTLR
Template Known Secondary structure 
STT


.

SSSSS

TT

BS

S
B
TTS
BT
S

B



B
S
SS
Template Predicted Secondary structure 








.




























Template SS confidence 















































































   158.160.........170........ .180.........190.........200.........210.........220.........230......
 
   243......250.........260.........270.........280 .........290.........300.........310.........320
Predicted Secondary structure 















..















Query SS confidence 





































. .







































Query Sequence  GHAQMVNFEALRPLAAEEARDAFVQGEDIVLSEENEFP. . TQVGDASGTPHLSVGCVRNDYGMPEQVQFWSVADNVRFGG
Query Conservation 
   

 
        
 
         
        
..     
 
     

                  


 


Alig confidence 





































..







































Template Conservation 
   

 
        
 
         
           
      
     

                  


 


Template Sequence  AHAEAVSVEFARPVTPEAAREVLKEAPGVEVVDEPEAKRYPMPLTASGKWDVEVGRIRKSLAFENGLDFFVVGDQLLKGA
Template Known Secondary structure  SS


TTSTT

BGGGTB


STTTTT
SS
SSSTTTT
Template Predicted Secondary structure 






























Template SS confidence 















































































   237..240.........250.........260.........270.........280.........290.........300.........310......
 
   321........330..
Predicted Secondary structure 
Query SS confidence 











Query Sequence  ALMAVKIAEKLV
Query Conservation 







 

 
Alig confidence 











Template Conservation 








  
Template Sequence  ALNAVQIAEEWL
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 











   317..320........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions