Job Description P08390 Confidence 100.00% Date Thu Jan 5 11:01:25 GMT 2012 Rank 1 Aligned Residues 333 % Identity 48% Template c2qz9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: crystal structure of aspartate semialdehyde dehydrogenase2 ii from vibrio cholerae Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	W	N	I	A	V	L	G	A	T	G	A	V	G	E	A	L	L	E	T	L	A	E	R	Q	F	P	V	G	E	I	Y	A	L	A	R	N	E	S	A	G	E	Q	L	R	F	G	G	K	T	I	T	V	Q	D	A	A	E	F	D	W	T	Q	A	Q	L	A	F	F	V	A	G	K	E	A	T	A	A	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Q	F	N	V	A	I	F	G	A	T	G	A	V	G	E	T	M	L	E	V	L	Q	E	R	E	F	P	V	D	E	L	F	L	L	A	S	E	R	S	E	G	K	T	Y	R	F	N	G	K	T	V	R	V	Q	N	V	E	E	F	D	W	S	Q	V	H	I	A	L	F	S	A	G	G	E	L	S	A	K	W
Template Known Secondary structure										T	T	T	S													T	T												S	S	S	T	T						T	T								G	G	G			G	G	G		S						S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	E	A	T	N	S	G	C	L	V	I	D	S	S	G	L	F	A	L	E	P	D	V	P	L	V	V	P	E	V	N	P	F	V	L	T	D	Y	R	N	R	N	V	I	A	V	P	D	S	L	T	S	Q	L	L	A	A	L	K	P	L	I	D	Q	G	G	L	S	R	I	S	V	T	S	L	I	S	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	I	A	A	E	A	G	V	V	V	I	D	N	T	S	H	F	R	Y	D	Y	D	I	P	L	V	V	P	E	V	N	P	E	A	I	A	E	F	R	N	R	N	I	I	A	N	P	N	C	S	T	I	Q	M	L	V	A	L	K	P	I	Y	D	A	V	G	I	E	R	I	N	V	T	T	Y	Q	S	V	S
Template Known Secondary structure								T	T							S	S	T	T	T	T		T	T	S		B			T	T	T		G	G	G	G	G	G	G	G	T	T	S																																				G	G
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		A	Q	G	K	K	A	V	D	A	L	A	G	Q	S	A	K	L	L	N	G	I	P	I	D	E	E	D	F	F	G	R	Q	L	A	F	N	M	L	P	L	L	P	D	.	.	S	E	G	S	V	R	E	E	R	R	I	V	D	E	V	R	K	I	L	Q	D	E	G	L	M	I	S	A	S	V	V	Q	A	P	V
Query Conservation																																													.	.
Alig confidence																									.																				.	.
Template Conservation																									.
Template Sequence		G	A	G	K	A	G	I	D	E	L	A	G	Q	T	A	K	L	L	N	G	Y	P	A	.	E	T	N	T	F	S	Q	Q	I	A	F	N	C	I	P	Q	I	D	Q	F	M	D	N	G	Y	T	K	E	E	M	K	M	V	W	E	T	Q	K	I	F	N	D	P	S	I	M	V	N	P	T	C	V	R	V	P	V
Template Known Secondary structure		G	G																T	T	T				.			S	S	S	S	S			T	T			B	S			S		B		T	T	S	S	B														T	T		T	T									B		S
Template Predicted Secondary structure																									.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Y	G	H	A	Q	M	V	N	F	E	A	L	R	P	L	A	A	E	E	A	R	D	A	F	V	Q	G	E	D	I	V	L	S	E	E	N	E	F	P	T	Q	V	G	D	A	S	G	T	P	H	L	S	V	G	C	V	R	N	D	Y	G	M	P	E	Q	V	Q	F	W	S	V	A	D	N	V	R	F	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Y	G	H	A	E	A	V	H	V	E	T	R	A	P	I	D	A	E	Q	V	M	D	M	L	E	Q	T	D	G	I	E	L	F	R	G	A	D	F	P	T	Q	V	R	D	A	G	G	K	D	H	V	L	V	G	R	V	R	N	D	I	S	H	H	S	G	I	N	L	W	V	V	A	D	N	V	R	K	G	A
Template Known Secondary structure		S	S											S	S													T	S	T	T						T	T										T	T		S	S										T	T	S	S	S										T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	M	A	V	K	I	A	E	K	L	V	Q	E	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	N	A	V	Q	I	A	E	L	L	V	R	D	Y	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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