Job Description P08390 Confidence 100.00% Date Thu Jan 5 11:01:25 GMT 2012 Rank 10 Aligned Residues 306 % Identity 19% Template c2q49B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:probable n-acetyl-gamma-glutamyl-phosphate reductase; PDBTitle: ensemble refinement of the protein crystal structure of gene product2 from arabidopsis thaliana at2g19940 Resolution 2.19 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.							.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.
Query Sequence		E	G	W	N	I	A	V	L	G	A	T	G	A	V	G	E	A	L	L	E	T	L	A	E	R	Q	F	P	V	G	E	I	Y	A	L	A	R	N	E	S	A	G	E	Q	L	R	.	.	.	.	.	.	F	G	G	K	T	I	T	V	Q	D	A	A	E	F	D	W	T	Q	A	Q	L	A	F	F	V	A	G	K
Query Conservation																																																.	.	.	.	.	.
Alig confidence																											.	.																				.	.	.	.	.	.
Template Conservation																											.	.
Template Sequence		K	D	I	R	I	G	L	L	G	A	S	G	Y	T	G	A	E	I	V	R	L	L	A	N	H	.	.	P	H	F	Q	V	T	L	M	T	A	D	R	K	A	G	Q	S	M	E	S	V	F	P	H	L	R	A	Q	K	L	P	T	L	V	S	V	K	D	A	D	F	S	T	V	D	A	V	F	C	C	L	P	H
Template Known Secondary structure											T	T	S												T		.	.	S	S									G	G	G	T	T	S		G	G	G	T		G	G	G	T	T	S						B		T	T	T	S		T	T	S		S								T
Template Predicted Secondary structure																											.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.									.	.	.	.	.	110	.	.	.	.	.	.	.	.									.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																														.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Query Sequence		E	A	T	A	A	W	V	E	E	A	T	N	S	G	C	L	V	I	D	S	S	G	L	F	A	L	E	P	.	.	.	.	.	.	.	.	D	V	P	L	V	V	P	E	V	N	P	F	V	L	.	.	.	.	.	.	.	.	T	D	Y	R	N	R	N	V	I	A	V	P	D	S	L	T	S	Q	L	L	A	A
Query Conservation																														.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Alig confidence												.																		.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		G	T	T	Q	E	I	I	K	E	L	.	P	T	A	L	K	I	V	D	L	S	A	D	F	R	L	R	N	I	A	E	Y	E	E	W	Y	G	Q	P	H	K	A	V	E	L	Q	K	E	V	V	Y	G	L	T	E	I	L	R	E	D	I	K	K	A	R	L	V	A	N	P	G	C	Y	P	T	T	I	Q	L	P
Template Known Secondary structure		T	S							T	S	.		S	S							S	S	T	T	T		S										S	S			S						T	T																	S
Template Predicted Secondary structure												.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		141	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		L	K	P	L	I	D	Q	G	G	L	S	.	.	R	I	S	V	T	S	L	I	S	A	S	A	Q	G	K	K	A	V	D	A	L	A	G	Q	S	A	K	L	L	N	G	I	P	I	D	E	E	D	F	F	G	R	Q	L	A	F	N	M	L	P	L	L	P	D	S	E	G	S	V	R	E	E	R	R	I	V	D
Query Conservation													.	.
Alig confidence													.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Sequence		L	V	P	L	L	K	A	N	L	I	K	H	E	N	I	I	I	D	A	K	S	G	V	S	G	A	G	R	G	A	K	E	A	N	L	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	A	E	G	I	S	S	Y	G	V	T	R	H	R	H	V	P	E	I	E	Q	G	L	.
Template Known Secondary structure								T	T		B		S	S	S									G	G	G	G		S				G	G	G				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T						S		S			T										.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.																			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.					.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		E	V	R	K	I	L	Q	D	E	G	L	M	I	S	A	S	V	V	Q	A	P	V	F	Y	G	H	A	Q	M	V	N	F	E	A	L	R	P	L	A	A	E	E	A	R	D	A	F	V	Q	G	.	.	.	.	E	D	I	V	L	S	E	E	N	E	F	P	T	Q	V	G	D	A	S	G	T	P	H	L	S	V
Query Conservation																																																				.	.	.	.
Alig confidence		.	.	.																																																.	.	.	.															.
Template Conservation		.	.	.																																																																		.
Template Sequence		.	.	.	S	D	V	A	Q	S	K	V	T	V	S	F	T	P	H	L	M	P	M	I	R	G	M	Q	S	T	I	Y	V	E	M	A	P	G	V	R	T	E	D	L	H	Q	Q	L	K	T	S	Y	E	D	E	E	F	V	K	V	L	D	E	G	V	V	P	R	T	.	H	N	V	R	G	S	N	Y	C	H	M
Template Known Secondary structure		.	.	.					T	S												S	S	S	S										B		T	T															S	S		S	S						T	T					G	.	G	G	G	S	S	S	S
Template Predicted Secondary structure		.	.	.																																																																		.
Template SS confidence
					233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.					.	.	.	.
Predicted Secondary structure																																								.	.	.	.
Query SS confidence																																								.	.	.	.
Query Sequence		G	C	V	R	N	D	Y	G	M	P	E	Q	V	Q	F	W	S	V	A	D	N	V	R	F	G	G	A	L	M	A	V	K	I	A	E	K	L	V	.	.	.	.	Q	E	Y	L
Query Conservation																																								.	.	.	.
Alig confidence						.	.																																	.	.	.	.
Template Conservation						.	.
Template Sequence		S	V	F	P	.	.	D	R	I	P	G	R	A	I	I	I	S	V	I	D	N	L	V	K	G	A	S	G	Q	A	L	Q	N	L	N	I	M	L	G	Y	P	E	T	T	G	L
Template Known Secondary structure						.	.		S	S	T	T										T	T	T	T	T	T												T	T	S		T	T	T	T
Template Predicted Secondary structure						.	.
Template SS confidence
		309	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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