Job Description P08390 Confidence 97.91% Date Thu Jan 5 11:01:25 GMT 2012 Rank 139 Aligned Residues 114 % Identity 13% Template c2nu8D_ PDB info PDB header:ligase Chain: D: PDB Molecule:succinyl-coa ligase [adp-forming] subunit alpha; PDBTitle: c123at mutant of e. coli succinyl-coa synthetase Resolution 2.15 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		S	E	G	W	N	I	A	V	L	G	A	T	G	A	V	G	E	A	L	L	E	T	L	A	E	R	Q	F	P	V	G	E	I	Y	A	L	A	R	N	E	S	A	G	E	Q	L	R	F	G	G	K	T	I	T	V	Q	D	A	A	E	F	D	W	T	Q	.	.	A	Q	L	A	F	F	V	A	G	K	E	A	T
Query Conservation																																																																			.	.
Alig confidence																														.	.	.																.	.	.	.																.	.
Template Conservation																														.	.	.																.	.	.	.
Template Sequence		D	K	N	T	K	V	I	C	Q	G	F	T	G	S	Q	G	T	F	H	S	E	Q	A	I	A	Y	G	T	.	.	.	K	M	V	G	G	V	T	P	G	K	G	G	T	T	H	.	.	.	.	L	G	L	P	V	F	N	T	V	R	E	A	V	A	A	T	G	A	T	A	S	V	I	Y	V	P	A	P	F	C
Template Known Secondary structure			T	T							T	T	T	S														T		.	.	.								T	T		T	T				.	.	.	.	T	T					S	S																			G	G	G
Template Predicted Secondary structure																														.	.	.																.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.					.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.
Predicted Secondary structure															.																																		.	.
Query SS confidence															.																																		.	.
Query Sequence		A	A	W	V	E	E	A	T	N	S	G	C	L	.	V	I	D	S	S	G	L	F	A	L	E	P	D	V	P	L	V	V	P	E	V	N	P	F	V	L	T	D	Y	R	N	R	N	.	.	V	I	A	V	P	D	S
Query Conservation															.																																		.	.
Alig confidence															.									.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	S	I	L	E	A	I	D	A	G	I	K	L	I	I	T	I	T	E	G	I	.	.	.	.	.	.	.	.	.	.	P	T	L	D	M	L	T	V	K	V	K	L	D	E	A	G	V	R	M	I	G	P	N	T
Template Known Secondary structure											T	T												.	.	.	.	.	.	.	.	.	.																T						S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.											100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions