Job Description P08390 Confidence 100.00% Date Thu Jan 5 11:01:25 GMT 2012 Rank 2 Aligned Residues 332 % Identity 37% Template c2hjsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:usg-1 protein homolog; PDBTitle: the structure of a probable aspartate-semialdehyde dehydrogenase from2 pseudomonas aeruginosa Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	W	N	I	A	V	L	G	A	T	G	A	V	G	E	A	L	L	E	T	L	A	E	R	Q	F	P	V	G	E	I	Y	A	L	A	R	N	E	S	A	G	E	Q	L	R	F	G	G	K	T	I	T	V	Q	D	A	A	E	F	D	W	T	Q	A	Q	L	A	F	F	V	A	G	K	E	A	T	A	A	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	P	L	N	V	A	V	V	G	A	T	G	S	V	G	E	A	L	V	G	L	L	D	E	R	D	F	P	L	H	R	L	H	L	L	A	S	A	E	S	A	G	Q	R	X	G	F	A	E	S	S	L	R	V	G	D	V	D	S	F	D	F	S	S	V	G	L	A	F	F	A	A	A	A	E	V	S	R	A	H
Template Known Secondary structure										T	T	T	S													T	T				S								T	T	T	T	T						T	T								G	G	G			G	G	G		S						S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	E	A	T	N	S	G	C	L	V	I	D	S	S	G	L	F	A	L	E	P	D	V	P	L	V	V	P	E	V	N	P	F	V	L	T	D	Y	R	N	R	N	V	I	A	V	P	D	S	L	T	S	Q	L	L	A	A	L	K	P	L	I	D	Q	G	G	L	S	R	I	S	V	T	S	L	I	S	A	S
Query Conservation
Alig confidence																									.
Template Conservation																									.
Template Sequence		A	E	R	A	R	A	A	G	C	S	V	I	D	L	S	G	A	L	E	P	S	V	A	.	P	P	V	X	V	S	V	N	A	E	R	L	A	S	Q	A	A	P	F	L	L	S	S	P	C	A	V	A	A	E	L	C	E	V	L	A	P	L	L	A	T	L	D	C	R	Q	L	N	L	T	A	C	L	S	V	S
Template Known Secondary structure								T	T						T	T		T	T	T	T	T	T	S	.		B							G	G	G	G	G	G	S		S	S																					T	T	T														G	G
Template Predicted Secondary structure																									.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		A	Q	G	K	K	A	V	D	A	L	A	G	Q	S	A	K	L	L	N	G	I	P	I	D	E	E	D	F	F	G	R	Q	L	A	F	N	M	L	P	L	L	P	D	.	.	S	E	G	S	V	R	E	E	R	R	I	V	D	E	V	R	K	I	L	Q	D	E	G	L	M	I	S	A	S	V	V	Q	A	P	V
Query Conservation																																													.	.
Alig confidence																									.																				.	.
Template Conservation																									.
Template Sequence		S	L	G	R	E	G	V	K	E	L	A	R	Q	T	A	E	L	L	N	A	R	P	L	.	E	P	R	L	F	D	R	Q	I	A	F	N	L	L	A	Q	V	G	A	V	D	A	E	G	H	S	A	I	E	R	R	I	F	A	E	V	Q	A	L	L	G	E	R	I	G	P	L	N	V	T	C	I	Q	A	P	V
Template Known Secondary structure		G	G																	T	T				.			S	S	S	S	S			T	T			B	S	S	S	S		B		T	T	S		B														T	G	G	G	B											S
Template Predicted Secondary structure																									.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Y	G	H	A	Q	M	V	N	F	E	A	L	R	P	L	A	A	E	E	A	R	D	A	F	V	Q	G	E	D	I	V	L	S	E	E	N	E	F	P	T	Q	V	G	D	A	S	G	T	P	H	L	S	V	G	C	V	R	N	D	Y	G	M	P	E	Q	V	Q	F	W	S	V	A	D	N	V	R	F	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	F	G	D	S	L	S	V	T	L	Q	C	A	E	P	V	D	L	A	A	V	T	R	V	L	D	A	T	K	G	I	E	W	V	G	E	G	D	Y	P	T	V	V	G	D	A	L	G	Q	D	E	T	Y	V	G	R	V	R	A	G	Q	A	D	P	C	Q	V	N	L	W	I	V	S	D	N	V	R	K	G	A
Template Known Secondary structure		S	S											S	S														S	T	T						T	T										T	T	S	S											S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	M	A	V	K	I	A	E	K	L	V	Q	E	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	N	A	V	L	L	G	E	L	L	I	K	H	Y	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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