Job Description P08390 Confidence 100.00% Date Thu Jan 5 11:01:25 GMT 2012 Rank 3 Aligned Residues 330 % Identity 33% Template c2gz3D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:aspartate beta-semialdehyde dehydrogenase; PDBTitle: structure of aspartate semialdehyde dehydrogenase (asadh) from2 streptococcus pneumoniae complexed with nadp and aspartate-3 semialdehyde Resolution 2.10 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	N	I	A	V	L	G	A	T	G	A	V	G	E	A	L	L	E	T	L	A	E	R	Q	F	P	V	G	E	I	Y	A	L	A	R	N	E	S	A	G	E	Q	L	R	F	G	G	K	T	I	T	V	Q	D	A	A	E	F	D	W	T	Q	A	Q	L	A	F	F	V	A	G	K	E	A	T	A	A	W	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	T	V	A	V	V	G	A	T	G	A	V	G	A	Q	M	I	K	M	L	E	E	S	T	L	P	I	D	K	I	R	Y	L	A	S	A	R	S	A	G	K	S	L	K	F	K	D	Q	D	I	T	I	E	E	T	T	E	T	A	F	E	G	V	D	I	A	L	F	S	A	G	S	S	T	S	A	K	Y	A
Template Known Secondary structure									T	T	T	S												T		S	S											T	T	T	T	T						T	T										T	T	T	T	T	T		S						S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	A	T	N	S	G	C	L	V	I	D	S	S	G	L	F	A	L	E	P	D	V	P	L	V	V	P	E	V	N	P	F	V	L	T	D	Y	R	N	R	N	V	I	A	V	P	D	S	L	T	S	Q	L	L	A	A	L	K	P	L	I	D	Q	G	G	L	S	R	I	S	V	T	S	L	I	S	A	S	A
Query Conservation
Alig confidence																																						.	.
Template Conservation																																						.	.
Template Sequence		P	Y	A	V	K	A	G	V	V	V	V	D	N	T	S	Y	F	R	Q	N	P	D	V	P	L	V	V	P	E	V	N	A	H	A	L	D	.	.	A	H	N	G	I	I	A	C	P	N	C	S	T	I	Q	M	M	V	A	L	E	P	V	R	Q	K	W	G	L	D	R	I	I	V	S	T	Y	Q	A	V	S	G
Template Known Secondary structure								T							S	S	T	T	T	T		T	T	S		B							G	G	G	G	G	.	.	G			S																																				G	G	G
Template Predicted Secondary structure																																						.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.											.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		Q	G	K	K	A	V	D	A	L	A	G	Q	S	A	K	L	L	N	G	I	P	I	D	.	.	.	.	.	.	.	.	.	.	E	E	D	F	F	G	R	Q	L	A	F	N	M	L	P	L	L	P	D	.	.	S	E	G	S	V	R	E	E	R	R	I	V	D	E	V	R	K	I	L	Q	D	E	G	L	M	I
Query Conservation																									.	.	.	.	.	.	.	.	.	.																				.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation
Template Sequence		A	G	M	G	A	I	L	E	T	Q	R	E	L	R	E	V	L	N	D	G	V	K	P	C	D	L	H	A	E	I	L	P	S	G	G	D	K	K	H	Y	P	I	A	F	N	A	L	P	Q	I	D	V	F	T	D	N	D	Y	T	Y	E	E	M	K	M	T	K	E	T	K	K	I	M	E	D	D	S	I	A	V
Template Known Secondary structure		G																						G	G	G				S	S	S	S		T	T	S	S						T	T			B	S			S		B		T	T	S	S	B														T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.				.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.
Query SS confidence																																														.	.	.
Query Sequence		S	A	S	V	V	Q	A	P	V	F	Y	G	H	A	Q	M	V	N	F	E	A	L	R	P	L	A	A	E	E	A	R	D	A	F	V	Q	G	E	D	I	V	L	S	E	.	.	.	E	N	E	F	P	T	Q	V	G	D	A	S	G	T	P	H	L	S	V	G	C	V	R	N	D	Y	G	M	P	E	Q	V	Q
Query Conservation																																														.	.	.
Alig confidence																																														.	.	.								.
Template Conservation																																																								.
Template Sequence		S	A	T	C	V	R	I	P	V	L	S	A	H	S	E	S	V	Y	I	E	T	K	E	V	A	P	I	E	E	V	K	A	A	I	A	A	F	P	G	A	V	L	E	D	D	V	A	H	Q	I	Y	P	Q	A	.	I	N	A	V	G	S	R	D	T	F	V	G	R	I	R	K	D	L	D	A	E	K	G	I	H
Template Known Secondary structure									S		S	S											S	S													T	S	T	T						B	G	G	G	T	B					.				T	T		S	S										S	S		T	T
Template Predicted Secondary structure																																																								.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	W	S	V	A	D	N	V	R	F	G	G	A	L	M	A	V	K	I	A	E	K	L	V	Q	E	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	W	V	V	S	D	N	L	L	K	G	A	A	W	N	S	V	Q	I	A	E	T	L	H	E	R	G	L
Template Known Secondary structure								T	T	T	T	T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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