Job Description P08390 Confidence 100.00% Date Thu Jan 5 11:01:25 GMT 2012 Rank 13 Aligned Residues 309 % Identity 21% Template c2ep5B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:350aa long hypothetical aspartate-semialdehyde PDBTitle: structural study of project id st1242 from sulfolobus tokodaii strain7 Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.													50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	G	W	N	I	A	V	L	G	A	T	G	A	V	G	E	A	L	L	E	T	L	A	E	R	Q	F	P	V	G	E	I	Y	A	L	.	A	R	N	E	S	A	G	E	Q	L	R	F	.	.	.	.	.	.	.	.	.	.	.	.	G	G	K	T	I	T	V	Q	D	A	A	E	F	D	W	T	Q	A	Q
Query Conservation																																						.													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.									.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.
Template Sequence		A	D	K	I	K	V	S	L	L	G	S	T	G	M	V	G	Q	K	M	V	K	M	L	A	K	H	.	.	P	Y	L	E	L	V	K	V	S	A	S	P	S	K	I	G	K	K	Y	K	D	A	V	K	W	I	E	Q	G	D	I	P	E	E	V	Q	D	L	P	I	V	S	T	N	Y	E	D	H	K	D	V	D
Template Known Secondary structure											T	T	T	S											T	T		.	.	S	S										G	G	G	T	T	S	B	G	G	G	T					S	S	S	S			T	T	T	T	T		B				S	S	G	G	G	T	T	T		S
Template Predicted Secondary structure																												.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.									.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.
Query Sequence		L	A	F	F	V	A	G	K	E	A	T	A	A	W	V	E	E	A	T	N	S	G	C	L	V	I	D	S	S	G	L	F	A	L	E	P	D	V	P	L	V	V	P	E	V	N	P	F	V	L	T	D	Y	R	.	.	.	.	.	.	.	.	N	R	N	V	I	A	V	P	D	S	L	T	S	Q	L	L	A	A
Query Conservation																																																								.	.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	L	S	A	L	P	N	E	L	A	E	S	I	E	L	E	L	V	K	N	G	K	I	V	V	S	N	A	S	P	F	R	M	D	P	D	V	P	L	I	N	P	E	I	N	W	E	H	L	E	L	L	K	F	Q	K	E	R	K	G	W	K	G	I	L	V	K	N	P	N	C	T	A	A	I	M	S	M	P
Template Known Secondary structure																						T	T							S	S	T	T	T	T		T	T	S		B							G	G	G	G	G	G	G	G	T						T		S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		L	K	P	L	I	D	Q	G	G	L	S	R	I	S	V	T	S	L	I	S	A	S	A	Q	G	K	K	A	V	D	A	L	A	G	Q	S	A	K	L	L	N	G	I	P	I	D	E	E	D	F	F	G	R	Q	L	A	F	N	M	L	P	L	L	P	D	S	E	G	S	V	R	E	E	R	R	I	V	D	.	.
Query Conservation																																																																																.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	K	P	L	I	E	I	A	T	K	S	K	I	I	I	T	T	L	Q	A	V	S	G	A	G	Y	N	G	I	S	F	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	E	G	N	I	I	P	Y	I	K	G	E	E	D	K	I	A	K	E	L	T	K	L	N	G	K
Template Known Secondary structure			G	G	G						T	S										G	G	G	G		T	T	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T			B				T	T													T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.																						.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.															.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	V	R	K	I	L	Q	D	E	G	L	M	I	S	A	S	V	V	Q	A	P	V	F	Y	G	H	A	Q	M	V	N	F	E	A	L	R	P	L	A	A	E	E	A	R	D	A	F	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	D	I	V	L	S	E	E	N	E	F	P	T	Q	V	G
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	N	N	Q	I	I	P	A	N	L	D	S	T	V	T	S	I	R	V	P	T	R	V	G	H	M	G	V	I	N	I	V	T	N	E	R	I	N	I	E	E	I	K	K	T	L	K	N	F	K	S	L	P	Q	Q	K	N	L	P	T	A	P	K	Q	P	I	I	V	R	D	E	E	D	R	P	Q	P	I	I
Template Known Secondary structure				S	S	S																S		S	S											S	S													T								T	T		T	T			S	S	S						S	T	T
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		285			.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		D	.	.	A	S	G	T	P	H	L	S	V	G	C	V	R	N	D	Y	G	M	P	E	Q	V	Q	F	W	S	V	A	D	N	V	R	F	G	G	A	L	M	A	V	K	I	A	E	K	L	V	Q	E	Y	L
Query Conservation			.	.
Alig confidence			.	.																.	.	.
Template Conservation																				.	.	.
Template Sequence		D	V	N	A	E	S	G	M	A	V	T	V	G	R	I	R	H	E	.	.	.	N	N	V	L	R	L	V	V	L	G	D	N	L	V	R	G	A	A	G	I	T	I	L	T	V	E	V	M	K	E	L	G	Y
Template Known Secondary structure			T	T					T	S										.	.	.	T	T										T	T	T	T	T	T														T	T
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.				.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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