Job Description P08390 Confidence 98.35% Date Thu Jan 5 11:01:25 GMT 2012 Rank 104 Aligned Residues 99 % Identity 19% Template c2dt5A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 Resolution 2.16 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		M	S	E	G	W	N	I	A	V	L	G	A	T	G	A	V	G	E	A	L	L	E	T	L	A	E	R	Q	F	P	V	G	E	I	Y	A	L	A	R	.	.	N	E	S	A	G	E	Q	L	R	F	G	G	K	T	I	T	V	Q	D	A	A	E	F	D	W	T	Q	A	Q	L	A	F	F	V	A	G	K	E	A
Query Conservation																																									.	.
Alig confidence														.															.	.											.	.									.
Template Conservation														.															.	.																					.
Template Sequence		L	N	R	K	W	G	L	C	I	V	G	M	.	G	R	L	G	S	A	L	A	D	Y	P	G	F	G	.	.	E	S	F	E	L	R	G	F	F	D	V	D	P	E	K	V	G	R	P	V	.	R	G	G	V	I	E	H	V	D	L	L	P	Q	R	V	P	G	R	I	E	I	A	L	L	T	V	P	R	E	A
Template Known Secondary structure		T	T	S										.	S										S				.	.	S	S									S		T	T	T	T	T				.	T	T						G	G	G					S	T	T	T								S
Template Predicted Secondary structure														.															.	.																					.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	A	W	V	E	E	A	T	N	S	G	C	L	V	I	D	S	S	G	L	F	A	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	K	A	A	D	L	L	V	A	A	G	I	K	G	I	L	N	F	A	P	V	V	L	E
Template Known Secondary structure													T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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