Job Description P08390 Confidence 96.41% Date Thu Jan 5 11:01:25 GMT 2012 Rank 318 Aligned Residues 143 % Identity 14% Template c1zcjA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:peroxisomal bifunctional enzyme; PDBTitle: crystal structure of 3-hydroxyacyl-coa dehydrogenase Resolution 1.90 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.																				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	A	V	L	G	A	T	G	A	V	G	E	A	L	L	E	T	L	A	E	R	Q	F	P	V	G	E	I	Y	A	L	A	R	N	E	S	A	G	E	Q	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	G	K	T	I	T	V	Q	D	A	A	E	F	D	W	T	Q
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.															.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.															.	.	.
Template Sequence		S	V	G	V	L	G	L	.	G	T	M	G	R	G	I	A	I	S	F	A	R	V	.	.	.	G	I	S	V	V	A	V	E	S	D	P	K	Q	L	D	A	A	K	K	I	I	T	F	T	L	E	K	E	A	S	R	A	H	Q	N	G	Q	A	S	A	K	P	K	L	R	F	S	S	S	T	K	E	L	S	T
Template Known Secondary structure									.	S												T	T	.	.	.	T								S	S																									T	T												S		G	G	G	G	T	T
Template Predicted Secondary structure									.															.	.	.
Template SS confidence
		298	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.				.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.						.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.									.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																	.	.	.	.	.																						.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.																						.	.	.	.	.	.	.	.
Query Sequence		A	Q	L	A	F	F	V	A	G	K	E	A	T	A	A	.	.	.	.	.	W	V	E	E	A	T	N	S	G	C	L	V	I	D	S	S	G	L	F	A	L	.	.	.	.	.	.	.	.	E	P	D	V	P	L	V	V	P	E	V	N	P	F	V	L	T	D	Y	R	N	R	N	V	I	A	V	P	D	S	L
Query Conservation																	.	.	.	.	.																						.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.																						.	.	.	.	.	.	.	.																						.	.
Template Conservation																																																																								.	.
Template Sequence		V	D	L	V	V	E	A	V	F	E	D	M	N	L	K	K	K	V	F	A	E	L	S	A	L	C	K	P	G	A	F	L	C	T	N	T	S	A	L	N	V	D	D	I	A	S	S	T	D	R	P	Q	L	V	I	G	T	H	F	F	S	P	A	H	V	M	R	L	L	E	.	.	V	I	P	S	R	Y	S	S
Template Known Secondary structure			S								S																S		T	T								S	S	S							T	T	S	S		G	G	G								S	S	T	T	T						.	.					S	S
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.			.	.	.	.	.	.	450	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	Q	L	L	A	A	L	K	P	L	I	D	Q	G	G	L	S	R	I	S	V
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		P	T	T	I	A	T	V	M	S	.	L	S	K	K	I	G	K	I	G	V	V	V
Template Known Secondary structure											.					T	T						B
Template Predicted Secondary structure											.
Template SS confidence
		452	.	.	.	.	.	.	.	460		.	.	.	.	.	.	.	.	.	470	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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