Job Description P08390 Confidence 100.00% Date Thu Jan 5 11:01:25 GMT 2012 Rank 12 Aligned Residues 297 % Identity 18% Template c1vknC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:n-acetyl-gamma-glutamyl-phosphate reductase; PDBTitle: crystal structure of n-acetyl-gamma-glutamyl-phosphate reductase2 (tm1782) from thermotoga maritima at 1.80 a resolution Resolution 1.80 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.																	.
Query SS confidence																																														.	.	.	.																	.
Query Sequence		W	N	I	A	V	L	G	A	T	G	A	V	G	E	A	L	L	E	T	L	A	E	R	Q	F	P	V	G	E	I	Y	A	L	A	R	N	E	S	A	G	E	Q	L	R	.	.	.	.	F	G	G	K	T	I	T	V	Q	D	A	A	E	F	D	W	.	T	Q	A	Q	L	A	F	F	V	A	G	K	E	A	T
Query Conservation																																														.	.	.	.																	.
Alig confidence																									.	.																				.	.	.	.																	.
Template Conservation																									.	.
Template Sequence		I	R	A	G	I	I	G	A	T	G	Y	T	G	L	E	L	V	R	L	L	K	N	H	.	.	P	E	A	K	I	T	Y	L	S	S	R	T	Y	A	G	K	K	L	E	E	I	F	P	S	T	L	E	N	S	I	L	S	E	F	D	P	E	K	V	S	K	N	C	D	V	L	F	T	A	L	P	A	G	A	S
Template Known Secondary structure								S	T	T	S														.	.	T	T									T	T	T	T	T	S	B						G	G	G					B		B												S							S	T	T
Template Predicted Secondary structure																									.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.																			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	W	V	E	E	A	T	N	S	G	C	L	V	I	D	S	S	G	L	F	A	L	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	P	L	V	V	P	E	V	N	P	F	V	L	T	D	Y	R	N	R	N	V	I	A	V	P	D	S	L	T	S	Q	L	L	A	A	L
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation									.	.																																																		.	.	.
Template Sequence		Y	D	L	V	R	E	L	.	.	K	G	V	K	I	I	D	L	G	A	D	F	R	F	D	D	P	G	V	Y	R	E	W	Y	G	K	E	L	S	G	Y	E	N	I	K	R	V	Y	G	L	P	E	L	H	R	E	E	I	K	.	.	.	N	A	Q	V	V	G	N	P	G	C	Y	P	T	S	V	I	L	A	L
Template Known Secondary structure									.	.		S						S	S	S	T	T	T		S	S													T	T	G	G	G	S															T	.	.	.	T		S
Template Predicted Secondary structure									.	.																																																		.	.	.
Template SS confidence
		80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		142	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		K	P	L	I	D	Q	G	G	L	.	.	S	R	I	S	V	T	S	L	I	S	A	S	A	Q	G	K	K	A	V	D	A	L	A	G	Q	S	A	K	L	L	N	G	I	P	I	D	E	E	D	F	F	G	R	Q	L	A	F	N	M	L	P	L	L	P	D	S	E	G	S	V	R	E	E	R	R	I	V	D	E
Query Conservation											.	.
Alig confidence											.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	P	A	L	K	H	N	L	V	D	P	E	T	I	L	V	D	A	K	S	G	V	S	G	A	E	K	V	D	Y	L	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	N	E	S	L	R	P	Y	N	V	A	K	H	R	H	V	P	E	X	E	Q	E	L	G	K
Template Known Secondary structure							T	T		S			S										G	G	G				G	G	G	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T						S	T	T			T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.																						.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		V	R	K	I	L	Q	D	E	G	L	M	I	S	A	S	V	V	Q	A	P	V	F	Y	G	H	A	Q	M	V	N	F	E	A	L	R	P	L	A	.	.	A	E	E	A	R	D	A	F	V	Q	G	E	D	I	V	L	S	E	E	N	E	F	P	T	Q	V	G	D	A	S	G	T	P	H	L	S	V	G	C	V
Query Conservation																																								.	.
Alig confidence		.	.	.	.																																			.	.																										.
Template Conservation		.	.	.	.																																																														.
Template Sequence		.	.	.	.	I	S	G	K	K	V	N	V	V	F	T	P	H	L	V	P	X	T	R	G	I	L	S	T	I	Y	V	K	T	D	K	S	L	E	E	I	H	E	A	Y	L	E	F	Y	K	N	E	P	F	V	H	V	L	P	X	G	I	Y	P	S	T	.	K	W	C	Y	G	S	N	H	V	F	I	G	X	Q
Template Known Secondary structure		.	.	.	.			S	S												S	S	S	S											S	S														T	T		T	T						T	T					G	.	G	G	G	T	T	S	S
Template Predicted Secondary structure		.	.	.	.																																																														.
Template SS confidence
						217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.					.	.	.	.
Predicted Secondary structure																																					.	.	.	.
Query SS confidence																																					.	.	.	.
Query Sequence		R	N	D	Y	G	M	P	E	Q	V	Q	F	W	S	V	A	D	N	V	R	F	G	G	A	L	M	A	V	K	I	A	E	K	L	V	.	.	.	.	Q	E	Y	L
Query Conservation																																					.	.	.	.
Alig confidence					.	.																															.	.	.	.
Template Conservation					.	.
Template Sequence		X	E	E	.	.	R	T	N	T	L	I	L	X	S	A	I	D	N	L	V	K	G	A	S	G	Q	A	V	Q	N	X	N	I	X	F	G	L	D	E	T	K	G	L
Template Known Secondary structure				T	.	.	T	T	T										T	T	T	T	T	T												T	T			T	T	T	T
Template Predicted Secondary structure					.	.
Template SS confidence
		292	.	.			.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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