Job Description P08390 Confidence 96.06% Date Thu Jan 5 11:01:25 GMT 2012 Rank 358 Aligned Residues 95 % Identity 26% Template c1ldbA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:apo-l-lactate dehydrogenase; PDBTitle: structure determination and refinement of bacillus2 stearothermophilus lactate dehydrogenase Resolution 2.80 Å

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		1	.	.	.	.			.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure							.	.																																					.	.											.	.	.	.
Query SS confidence							.	.																																					.	.											.	.	.	.
Query Sequence		M	S	E	G	W	.	.	N	I	A	V	L	G	A	T	G	A	V	G	E	A	L	L	E	T	L	A	E	R	Q	F	P	V	G	E	I	Y	A	L	A	R	N	E	.	.	S	A	G	E	Q	L	R	F	G	G	.	.	.	.	K	T	I	T	V	Q	D	A	A	E	F	D	W	T	Q	A	Q	L	A	F	F
Query Conservation							.	.																																					.	.											.	.	.	.
Alig confidence							.	.								.																	.												.	.											.	.	.	.
Template Conservation																.																	.
Template Sequence		M	K	N	N	G	G	A	R	V	V	V	I	G	A	.	G	F	V	G	A	S	Y	V	F	A	L	M	N	Q	G	I	.	A	D	E	I	V	L	I	D	A	N	E	S	K	A	I	G	D	A	M	D	F	N	H	G	K	V	F	A	P	K	P	V	D	I	W	D	Y	D	D	C	R	D	A	D	L	V	V	I
Template Known Secondary structure				S			S	S								.	S												T	T	T		.		S							S	S															G	G	G	T	T								G	G	G		S	S		S
Template Predicted Secondary structure																.																	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		73	.	.	.	.	.	.									80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.											.	.
Query SS confidence									.	.	.	.	.	.	.	.											.	.
Query Sequence		V	A	G	K	E	A	T	.	.	.	.	.	.	.	.	A	A	W	V	E	E	A	T	N	S	.	.	G	C	L	V	I	D	S	S
Query Conservation									.	.	.	.	.	.	.	.											.	.
Alig confidence									.	.	.	.	.	.	.	.											.	.
Template Conservation
Template Sequence		C	A	G	A	N	D	L	V	D	K	N	I	A	I	F	R	S	I	V	E	S	V	M	A	S	G	F	Q	G	L	F	L	V	A	T
Template Known Secondary structure																										T	T			S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions