Job Description P08390 Confidence 96.13% Date Thu Jan 5 11:01:25 GMT 2012 Rank 350 Aligned Residues 74 % Identity 22% Template c1b8vA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (malate dehydrogenase); PDBTitle: malate dehydrogenase from aquaspirillum arcticum Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.	.							.	.	.	.	.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.															.	.	.	.	.	.											.	.	.	.	.	.
Query SS confidence																														.	.	.	.															.	.	.	.	.	.											.	.	.	.	.	.
Query Sequence		S	E	G	W	N	I	A	V	L	G	A	T	G	A	V	G	E	A	L	L	E	T	L	A	E	R	Q	F	.	.	.	.	P	V	G	E	I	Y	A	L	A	R	N	E	S	A	.	.	.	.	.	.	G	E	Q	L	R	F	G	G	K	T	.	.	.	.	.	.	I	T	V	Q	D	A	A	E	F	D	W	T
Query Conservation																														.	.	.	.															.	.	.	.	.	.											.	.	.	.	.	.
Alig confidence																														.	.	.	.															.	.	.	.	.	.											.	.	.	.	.	.
Template Conservation
Template Sequence		K	T	P	M	R	V	A	V	T	G	A	A	G	Q	I	C	Y	S	L	L	F	R	I	A	N	G	D	M	L	G	K	D	Q	P	V	I	L	Q	L	L	E	I	P	N	E	K	A	Q	K	A	L	Q	G	V	M	M	E	I	D	D	C	A	F	P	L	L	A	G	M	T	A	H	A	D	P	M	T	A	F	K
Template Known Secondary structure											S	T	T	S												T	T	T	T	T		T	T											S																	T	T	T		T	T								S						T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		66	.	.	.	70	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	Q	L	A	F	F	V	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	D	V	A	L	L	V	G	A
Template Known Secondary structure		T		S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions