 |
Job Description | P76594 | Confidence | 99.86% | Date | Thu Jan 5 12:24:56 GMT 2012 |
Rank | 26 | Aligned Residues | 131 |
% Identity | 22% | Template | d2nu7b1 |
SCOP info | Flavodoxin-like
| Succinyl-CoA synthetase domains
| Succinyl-CoA synthetase domains
|
Resolution | 2.20 |
|
 |
  |   |
285 | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | L | R | G | D | R | L | M | I | I | S | N | G | A | A | P | A | A | L | A | L | D | A | L | W | S | R | N | G | K | L | A | T | L | S | E | E | T | C | Q | K | L | R | D | A | L | P | E | H | V | A | I | S | N | P | L | D | L | R | D | D | A | S | S | E | H | Y | I | K | T | L | D | I | L | L | H | S | Q | D | F |
Query Conservation |   |
  |   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |   |   |
|
|
|
|   |   |   |   |   |
|
|   |
|
|   |
|
|   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   | . |
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|   |
|
Template Sequence |   |
A | L | D | G | N | . |
I | G | C | M | V | N | G | A | G | L | A | M | G | T | M | D | I | V | K | L | H | G | G | E | P | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | F | L | D | V | G | G | G | A | T | K | E | R | V | T | E | A | F | K | I | I | L | S | D | D | K | V |
Template Known Secondary structure |   |
 |
| S | S | S | . |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| B |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | S | T | T |
|
Template Predicted Secondary structure |   |
 |  |
|
|
| . |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
254 | . | . | . | . | |
. | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . |
  |
  |   |
365 | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | |
|
430 | . | . | . | . | . | . | . | . | . | 440 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | A | L | M | V | I | H | S | P | S | A | A | A | P | A | T | E | S | A | Q | V | L | I | E | A | V | K | H | H | P | R | S | K | Y | V | S | L | L | T | N | W | C | G | E | H | S | S | Q | E | A | R | R | L | F | S | E | A | G | L | P | T | Y | R | T | P | . |
. |
E | G | T | I | T | A | F | M | H | M | V | E |
Query Conservation |   |
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|
|   |
|   |
|
| . | . |
|   |
|
|   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |   | . |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   | . | . |   |
|
|
| . |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|   |   |
|   |   |
|   |
|
|   |   |   |   |   |   |
|   |
Template Sequence |   |
K | A | V | L | V | N | I | . |
F | G | G | I | V | R | C | D | L | I | A | D | G | I | I | G | A | V | A | E | V | G | V | N | . |
. |
V | P | V | V | . |
V | R | L | E | G | N | N | A | E | L | G | A | K | K | L | A | D | S | G | L | N | I | I | A | A | K | G | L | T | D | A | A | Q | Q | V | V | A | A | V | E |
Template Known Secondary structure |   |
|  |  |  |  |  |  | . |  | S |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| . | . | S |
|  |  | . |  |  |  |  | S | T | T |  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  | T | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
| . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |
|  |  |  | . |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
312 | . | . | . | . | . | . | |
. | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | |
|
. | . | . | . | |
. | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|