 |
Job Description | P76594 | Confidence | 97.11% | Date | Thu Jan 5 12:24:56 GMT 2012 |
Rank | 284 | Aligned Residues | 109 |
% Identity | 19% | Template | d2gz1a1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
|
Resolution | 1.80 |
|
 |
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |
|
|
|
|
|  |  |
|
|  |  |
|
|
|
|  | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | I | A | V | I | G | A | S | M | K | P | N | R | A | G | Y | L | M | M | R | N | L | L | A | G | G | F | . |
N | G | P | V | L | P | V | T | P | A | W | K | A | V | L | G | V | L | A | W | P | D | I | . |
. |
. |
. |
. |
. |
. |
A | S | L | P | F | T | P | D | L | A | V | L | C | T | N | A | S | R | N | L | A | L |
Query Conservation |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|
|   |
|
|   |   |   |
|
| . |   |
|   |
|
|
|
|
|
|   |   |   |   |
|   |
|   |   |   |
|   |
|
| . | . | . | . | . | . | . |   |   |
|
|   |   |   |
|
|
|
|
|   |
|
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
| . | . | . |
|   |
|
|   |   |
|
|
|
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |   |   |
|   |   |   |
Template Sequence |   |
T | V | A | V | V | G | A | T | . |
. |
. |
G | A | V | G | A | Q | M | I | K | M | L | E | E | S | T | L | P | I | D | K | I | R | Y | L | A | S | A | R | S | A | G | K | S | L | K | F | K | D | Q | D | I | T | I | E | E | T | T | E | T | A | F | E | G | V | D | I | A | L | F | S | A | G | S | S | T | S | A | K | Y |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | T | . | . | . | S |  |  |  |  |  |  |  |  |  |  |  | T |
|
| S |
|  |  |  |  |  |  |  |  |
| G | G | G | T | T |
|  |  |  |  | T | T |  |  |  |  |  |  |  |
|
| T | T | T | T | T | T |
| S |  |  |  |  |
| S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | |
|
|
. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | E | L | G | E | K | G | C | K | T | C | I | I | L | S | A | P | A | S | Q | . |
. |
. |
. |
. |
. |
. |
. |
H | E | D | L | R | A | C | A | L | R | H | N | M | R | L | L | G | P | N | S |
Query Conservation |   |
|   |
|   |   |   |   |
|
|
|   |
|
|
|   |
|   |
|
|   |
| . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   | . |
|
|
|
|
|   |   |
|
|   |   |   |   |   |
|   |   |
|
|
|
|
|   |   |   |
|   |   |   |   |   |
|
|
|
|
|   |
|
Template Sequence |   |
A | P | Y | A | V | K | A | G | V | V | . |
V | V | D | N | T | S | Y | F | R | Q | N | P | D | V | P | L | V | V | P | E | V | N | A | H | A | L | D | A | H | N | G | I | I | A | C | P | N | A |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |
|  | . |  |  |  |
| S | S | T | T | T | T |
| T | T | S |
| B |
|
|  |  |  |  | G | G | G | G | G | G |
|
| S |  |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  | . |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | |
. | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|