 |
Job Description | P76594 | Confidence | 97.47% | Date | Thu Jan 5 12:24:56 GMT 2012 |
Rank | 246 | Aligned Residues | 106 |
% Identity | 22% | Template | d1ro5a_ |
SCOP info | Acyl-CoA N-acyltransferases (Nat)
| Acyl-CoA N-acyltransferases (Nat)
| Autoinducer synthetase
|
Resolution | 2.30 |
|
 |
  |   |
774 | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 810 | . | |
. | . | . | . | . | . | . | . | 820 | . | . | |
|
|
|
. | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  | . |  |  |  |
|
|  |  |
|
|
|
| . | . | . | . |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
Query Sequence |   |
D | Y | D | R | E | M | A | F | V | A | V | R | R | I | D | Q | T | E | E | I | L | G | V | T | R | A | I | S | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | D | N | I | D | A | E | F | A | . |
V | L | V | R | S | D | L | K | G | L | G | . |
. |
. |
. |
L | G | R | R | L | M |
Query Conservation |   |
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |
|
|
| . |
|   |
|   |   |   |   |
|
|   |
| . | . | . | . |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|   | . | . |
|
|
|   |   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |
Template Sequence |   |
G | Y | D | A | L | S | P | Y | Y | M | L | I | Q | E | D | G | Q | . |
. |
V | F | G | C | W | R | I | L | D | T | T | G | P | Y | M | L | K | N | T | F | P | E | L | L | H | G | K | E | A | P | C | S | P | H | I | W | E | L | S | R | F | A | I | N | S | G | Q | K | G | S | L | G | F | S | D | C | T | L | E | A | M |
Template Known Secondary structure |   |
G | G | G | G | S |
|
|  |  |  |  |  |  |  | T | T |  | . | . |  |  |  |  |  |  |  |  |  | T | T | S |
|
|  |  |  |  | T |
| G | G | G | G | T | T |
|
|
|
|
|
| T | T |  |  |  |  |  |  |  |  |  |
|
| S | T | T |
|
| S |
| S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
|
. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . |
  |
  |   |
829 | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . | . | 870 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 880 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . | . |
|  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | K | L | I | T | Y | T | R | D | H | G | L | Q | R | L | N | G | I | T | M | P | N | N | R | G | M | V | A | L | A | R | K | L | G | F | N | V | D | I | Q | L | E | E | . |
. |
. |
. |
. |
. |
G | I | V | G | L | T | L | N | L | A | Q | R | E |
Query Conservation |   |
  |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |
|   |
|
|   |   |
|   |   |
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |   | . | . | . |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
R | A | L | A | R | Y | S | L | Q | N | D | I | Q | T | L | V | T | V | T | . |
. |
. |
T | V | G | V | E | K | M | M | I | R | A | G | L | D | V | S | R | F | G | P | H | L | K | I | G | I | E | R | A | V | A | L | R | I | E | L | N | A | K | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  | S | S |
|
|  |  |  | T | T |  |  |  |  |  |  |  |  |  |
| S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
126 | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | |
|
|
. | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|