Job Description P76594 Confidence 98.55% Date Thu Jan 5 12:24:56 GMT 2012 Rank 169 Aligned Residues 204 % Identity 23% Template c3u9sE_ PDB info PDB header:ligase Chain: E: PDB Molecule:methylcrotonyl-coa carboxylase, alpha-subunit; PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc) 750 kd holoenzyme, coa complex Resolution 3.50 Å

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		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	I	H	S	P	S	A	A	A	P	A	T	E	S	A	Q	V	L	I	E	A	V	K	H	H	P	R	S	K	Y	V	S	L	L	T	N	W	C	G	E	H	S	S	Q	E	A	R	R	L	F	S	E	A	G	L	P	T	Y	R	T	P	E	G	T	I	T	A	F	M	H	M	V	E	Y	R	R	N	Q	K
Query Conservation
Alig confidence																														.	.	.																																											.	.	.	.	.	.	.
Template Conservation																														.	.	.																																											.	.	.	.	.	.	.
Template Sequence		A	V	D	L	G	G	A	K	P	A	D	S	Y	L	R	G	D	R	I	I	A	A	A	L	A	S	G	A	.	.	.	Q	A	I	H	P	G	Y	G	F	L	S	E	N	A	D	F	A	R	A	C	E	E	A	G	L	L	F	L	G	P	P	A	A	A	I	D	A	M	G	S	K	S	.	.	.	.	.	.	.
Template Known Secondary structure								S	S	S	T	T	T	T	T												T	T		.	.	.							S	S	T	T	S	S		T								T	T	T				S	S	S								T	T	S			.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.																																											.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.			.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		Q	L	R	E	T	P	A	L	P	S	N	L	T	S	N	T	A	E	A	H	L	L	L	Q	Q	A	I	A	E	G	A	T	S	L	D	T	H	E	V	Q	P	I	L	Q	A	Y	G	M	N	T	L	P	T	W	.	.	I	A	S	D	S	T	E	A	V	H	I	A	E	Q	I	G	Y	P	V	A	L	K	L	R
Query Conservation																																																								.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	K	A	L	M	E	E	A	G	V	P	L	V	P	G	Y	H	G	E	A	Q	D	L	E	T	F	R	R	E	A	G	R	I	G	Y	P	V	L	L	K	A	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T									S	S				T	T								T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																							165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	D	I	P	H	K	S	E	V	Q	G	V	M	L	Y	L	R	T	A	N	E	V	Q	Q	A	A	N	A	I	F	D	R	V	K	M	A	W	P	Q	A	R	V	H	G	L	L	V	Q	S	M	A	N	R	A	G	A	Q	E	L	R	V	V	V	E	H	D	P	V	F	G	P	L	I	M	L	G	E	G	G
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.														.	.																.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.														.	.																.
Template Sequence		A	M	K	V	.	.	.	.	.	.	.	.	.	.	.	.	V	E	R	E	A	E	L	A	E	A	L	S	.	.	.	.	.	.	.	.	.	.	.	S	A	Q	R	A	R	M	L	V	E	K	Y	L	.	.	L	K	P	R	H	V	E	I	Q	V	F	A	D	R	H	.	G	H	C	L	Y	L	N	E	R	D
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.			S	S	G	G	G	T					.	.	.	.	.	.	.	.	.	.	.	S													.	.	S	S		B										T	T	.	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.														.	.																.
Template SS confidence
		208	.	210	.													.	.	.	.	.	.	.	.	220	.	.	.												.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.
		606	.	.	.	610	.	.	.	.	.	.	.	.	.	620				.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		V	E	W	R	P	E	D	Q	A	V	V	A	L	P	P	.	.	.	L	N	M	N	L	A	R	Y	L	V	I	Q	G	I	K	S	K	K	I	R	A	R	S	A
Query Conservation																	.	.	.
Alig confidence																	.	.	.
Template Conservation
Template Sequence		C	S	I	Q	R	R	H	Q	K	V	V	E	E	A	P	A	P	G	L	G	A	E	L	R	R	A	M	G	E	A	A	V	R	A	A	Q	A	I	G	Y	V	G
Template Known Secondary structure					B	S	S	S	S	B						S		S	S																				T	T			S
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions