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Job DescriptionP76594
Confidence97.72%DateThu Jan 5 12:24:56 GMT 2012
Rank212Aligned Residues199
% Identity17%Templatec3se7A_
PDB info PDB header:ligaseChain: A: PDB Molecule:vana; PDBTitle: ancient vana
Resolution3.07 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   401........410.........420.........430.........440.........450.........460.........470.........480
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Query Sequence  LLTNWCGEHSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLRETPALPSNLTSNTAEAHLLLQQAIAEGATS
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Template Sequence  LPVLHGKLGEDGAIQGLLELSGIPYVGCDIQSSALCMDKS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   92.......100.........110.........120.........130.
 
   481........490.........500.........510.........520.........530.........540.........550.........560
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Query Sequence  LDTHEVQPILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTANEVQQAANAIFDRVK
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Template Sequence  . . . . LTYLVARSAGIATPNFWTVTADEKI. . PTDQLTYPVFVKPARSGSS. . . . . FGVSK. VAREEDLQGAVEAA. . . . .
Template Known Secondary structure  ....TT
B


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   132.......140.........150...... ...160.........170..... ....180 .........190....
 
   561........570.........580.........590.........600.........610......... 620.........630.........
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Query Sequence  MAWPQARVHGLLVQSMANRAGAQELRVVVEHDPVFGPLIMLGEGGVEWRPEDQAVVALP. PLNMNLARYLVIQGIKSKKI
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Template Sequence  . . . . REYDSKVLIEEAV. . . IGTEIGCAVMGN. . GPELITGEVDQITLSGSDNSAVTVPADISTTSRSLVQDTAKAVYRA
Template Known Secondary structure  ....TTT
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   195....200....... ..210......... 220.........230.........240.........250.........260.....
 
   640.........650.........660.........670.......
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Query Sequence  RARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHP
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Template Sequence  LGCRGLSRVDLF. . . . . . . . . . . . LTEDGKVVLNEVNT
Template Known Secondary structure  T

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TTS
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   280.........290. ........300.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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