Job Description P76594 Confidence 96.59% Date Thu Jan 5 12:24:56 GMT 2012 Rank 338 Aligned Residues 105 % Identity 13% Template c3oa0B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:lipopolysaccaride biosynthesis protein wbpb; PDBTitle: crystal structure of the wlba (wbpb) dehydrogenase from thermus2 thermophilus in complex with nad and udp-glcnaca Resolution 2.00 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.													.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query Sequence		K	S	I	A	V	I	G	A	S	M	K	P	N	R	A	G	Y	L	M	M	R	N	L	L	A	G	G	F	N	G	P	V	L	P	V	.	.	.	.	.	.	.	.	.	.	.	.	T	P	A	W	K	A	V	L	G	V	L	A	W	P	D	I	A	S	.	.	.	.	L	P	F	T	P	D	L	A	V	L	C
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Alig confidence											.	.	.																.								.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation											.	.	.																.
Template Sequence		T	R	F	A	L	T	G	L	A	.	.	.	G	Y	I	A	P	R	H	L	K	A	I	K	E	V	G	.	G	V	L	V	A	S	L	D	P	A	T	N	V	G	L	V	D	S	F	F	P	E	A	E	F	F	T	E	P	E	A	F	E	A	Y	L	E	D	L	R	D	R	G	E	G	V	D	Y	L	S	I	A
Template Known Secondary structure									T	T	.	.	.	S	S	S											T	T	.									S	S				G	G	G	G	G	T		T	T					S															T	T				S
Template Predicted Secondary structure											.	.	.																.
Template SS confidence
		2	.	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		T	N	A	S	R	N	L	A	L	L	E	E	L	G	E	K	G	C	K	T	C	I	I	.	.	.	L	S	A	P	A	S	Q	H	E	D	L	R	A	C	A	L	R	H	N	M	R	L	L
Query Conservation																									.	.	.
Alig confidence																			.						.	.	.
Template Conservation																			.
Template Sequence		S	P	N	H	L	H	Y	P	Q	I	R	M	A	L	R	L	G	.	A	N	A	L	S	E	K	P	L	V	L	W	P	E	E	I	A	R	L	K	E	L	E	A	R	T	G	R	R	V	Y
Template Known Secondary structure		S		G	G	G											T	T	.							S	S	S		S																T
Template Predicted Secondary structure																			.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions