Job Description P76594 Confidence 100.00% Date Thu Jan 5 12:24:56 GMT 2012 Rank 8 Aligned Residues 281 % Identity 14% Template c3mwdB_ PDB info PDB header:transferase Chain: B: PDB Molecule:atp-citrate synthase; PDBTitle: truncated human atp-citrate lyase with citrate bound Resolution 2.10 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50								.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.
Predicted Secondary structure																																						.	.	.										.	.	.	.	.	.	.																	.	.	.
Query SS confidence																																						.	.	.										.	.	.	.	.	.	.																	.	.	.
Query Sequence		L	E	A	L	L	R	P	K	S	I	A	V	I	G	A	S	M	K	P	N	R	A	G	Y	L	M	M	R	N	L	L	A	G	G	F	N	.	.	.	G	P	V	L	P	V	T	P	A	.	.	.	.	.	.	.	W	K	A	V	L	G	V	L	A	W	P	D	I	A	S	L	.	.	.	P	F	T	P	D	L
Query Conservation																																						.	.	.										.	.	.	.	.	.	.																	.	.	.
Alig confidence																																						.	.	.										.	.	.	.	.	.	.																	.	.	.
Template Conservation
Template Sequence		S	T	T	L	F	S	R	H	T	K	A	I	V	W	G	X	Q	T	R	A	V	Q	G	X	L	D	F	D	Y	V	C	S	R	D	E	P	S	V	A	A	X	V	Y	P	F	T	G	D	H	K	Q	K	F	Y	W	G	H	K	E	I	L	I	P	V	F	K	N	X	A	D	A	X	R	K	H	P	E	V	D	V
Template Known Secondary structure			S					T	T							S																T	T		S	S		S							T	T	S		S								T	T									S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.									.	.	.	.	140	.
Predicted Secondary structure																					.																.	.																														.	.	.	.	.	.	.	.
Query SS confidence																					.																.	.																														.	.	.	.	.	.	.	.
Query Sequence		A	V	L	C	T	N	A	S	R	N	L	A	L	L	E	E	L	G	E	.	K	G	C	K	T	C	I	I	L	S	A	P	A	S	Q	.	.	H	E	D	L	R	A	C	A	L	R	H	N	M	R	L	L	G	P	N	S	L	G	L	L	A	P	W	Q	G	.	.	.	.	.	.	.	.	L	N	A	S	F	S
Query Conservation																					.																.	.																														.	.	.	.	.	.	.	.
Alig confidence																					.																.	.																														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	N	F	A	S	L	R	S	A	Y	D	S	T	X	E	T	X	N	Y	A	Q	I	R	T	I	A	I	I	A	E	G	I	P	E	A	L	T	R	K	L	I	K	K	A	D	Q	K	G	V	T	I	I	G	P	A	T	V	G	G	I	K	P	G	C	F	K	I	G	N	T	G	G	X	L	D	N	I	L	A
Template Known Secondary structure								T	T	T									T	T	S	T	T									S																		T						S	S							T	T	T				T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		569	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.																										.
Query SS confidence																																													.	.																										.
Query Sequence		P	V	P	I	K	R	G	K	L	A	F	I	S	Q	S	A	A	V	S	N	T	I	L	D	W	A	Q	Q	R	K	M	G	F	S	Y	F	I	A	L	G	D	S	L	.	.	D	I	D	V	D	E	L	L	D	Y	L	A	R	D	S	K	T	S	A	I	L	L	Y	L	E	.	Q	L	S	D	A	R	R	F	V
Query Conservation																																													.	.																										.
Alig confidence																																													.	.																										.
Template Conservation
Template Sequence		S	K	L	Y	R	P	G	S	V	A	Y	V	S	R	S	G	G	X	S	N	E	L	N	N	I	I	S	R	T	T	D	G	V	Y	E	G	V	A	I	G	G	D	R	Y	P	G	S	T	F	X	D	H	V	L	R	Y	Q	D	T	P	G	V	K	X	I	V	V	L	G	E	I	G	G	T	E	E	Y	K	I	C
Template Known Secondary structure		T	T	T	T	S			S						S																S	S										S	S	S	S		S	S											T		T	T										S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		649	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.						240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		S	A	A	R	S	A	S	R	N	K	P	I	L	V	I	K	S	G	R	S	P	.	.	.	.	.	A	A	Q	R	L	L	N	T	T	A	G	M	D	P	A	W	D	A	A	I	Q	R	A	G	L	L	R	V	Q	D	T	H	E	L	F	S	A	V	E	T	L	S	H	M	R	P	L
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.
Template Conservation
Template Sequence		R	G	I	K	E	G	R	L	T	K	P	I	V	C	W	C	I	G	T	C	A	T	Q	A	S	E	T	A	V	A	K	N	Q	A	L	K	E	A	G	V	F	V	P	R	S	F	D	E	L	G	E	I	I	Q	S	V	Y	E	D	L	V	A	N	G	V	I	V	P	A	Q	E	V	P
Template Known Secondary structure						T	T	S			S									T	T				G	G	G	S											T	T		B			S	S	G	G	G															T	T	S
Template Predicted Secondary structure
Template SS confidence
		729	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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