|   |
484 | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | |
|
. | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  | . | . |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | E | V | Q | P | I | L | Q | A | Y | G | M | N | T | L | P | T | W | I | . |
. |
A | S | D | S | T | E | A | V | H | I | A | E | Q | I | G | Y | P | V | A | L | K | L | R | S | P | D | I | P | H | K | S | E | V | Q | G | V | M | L | Y | L | R | T | A | N | E | V | Q | Q | A | A | N | A | I | F | D | R | V | K | M |
Query Conservation |   |
  |
|
|
|   |
|
|   |
|
|
|
|
|
|   |   |   |   |   | . | . |
|   |
|   |
|
|
|   |   |
|
|   |   |
|
|   |
|
|
|
|
|   |   |
|   |   |
|   |
|
|
|
|   |
|
|
|   |
|   |
|   |
|   |
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |
Template Sequence |   |
F | N | Q | K | E | H | L | R | K | Y | G | I | P | M | A | E | H | R | E | L | V | E | N | T | P | A | E | L | A | K | V | G | E | Q | L | G | Y | P | L | M | L | K | S | K | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
R | G | N | F | R | . |
V | N | S | Q | D | D | I | P | E | A | L | E | A | L | . |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T | T |
|
| B |
|
|  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . |
|
|  |  |  | . |  |
| S | G | G | G |  |  |  |  |  |  | T | T | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . |
|
|
|  |  | . |  |
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
150 | . | . | . | . | |
. | . | . | . | . | 160 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
  |
  |   |
562 | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | |
|
. | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|  |  |
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | W | P | Q | A | R | V | H | G | L | L | V | Q | S | M | A | N | R | A | G | A | Q | E | L | R | V | V | V | E | H | D | P | V | F | G | P | L | I | M | L | G | E | G | G | V | E | W | R | P | E | D | Q | A | V | V | A | L | P | P | . |
. |
L | N | M | N | L | A | R | Y | L | V | I | Q | G | I | K | S | K | K | I |
Query Conservation |   |
  |   |
|   |   |   |
|   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |
|
|   |
|
|
|
|
|   |   |
|   |
|
|   |   |
|
|   |   |   |
|   |
|   |   |
|
|
| . | . |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |
|
|
Alig confidence |   |
. | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . |   |   |   |   |   |
|
|
|
|   |
| . | . |   |
|   |   |
|   |
|
|   |   |   |   |   |   | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|
Template Sequence |   |
. |
. |
. |
. |
. |
K | D | R | P | L | Y | A | E | K | W | A | . |
. |
Y | F | K | M | E | L | A | V | I | V | V | K | T | K | . |
. |
D | E | V | L | S | Y | P | T | V | E | T | V | Q | E | D | S | I | C | K | L | V | Y | A | P | A | R | N | V | S | D | A | I | N | Q | K | A | Q | E | L | A | R | K | A | V | A | A |
Template Known Secondary structure |   |
. | . | . | . | . |
| S | S |
|  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |
| S | . | . | S |
|  |  |  |
|
|
|  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | S |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
. | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
174 | . | . | . | . | . | 180 | . | . | . | . | |
|
. | . | . | . | . | 190 | . | . | . | . | . | . | . | . | |
|
. | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . |
  |
  |   |
640 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
R | A | R | S | A |
Query Conservation |   |
  |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
Template Sequence |   |
F | D | G | K | G |
Template Known Secondary structure |   |
S |
| S |
|  |
Template Predicted Secondary structure |   |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
245 | . | . | . | . |
  |