 |
Job Description | P76594 | Confidence | 94.18% | Date | Thu Jan 5 12:24:56 GMT 2012 |
Rank | 421 | Aligned Residues | 91 |
% Identity | 21% | Template | c3egoB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:probable 2-dehydropantoate 2-reductase; |
PDBTitle: crystal structure of probable 2-dehydropantoate 2-reductase2 pane from bacillus subtilis
|
Resolution | 1.90 Å |
|
 |
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
|
|  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | V | I | G | A | S | M | K | P | N | R | A | G | Y | L | M | M | R | N | L | L | A | G | G | F | N | G | P | V | L | P | V | T | P | A | W | K | A | V | L | G | V | L | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
W | P | D | I | A | S | L | P | F | T | P | D | L | A | V | L | C | T | N | A |
Query Conservation |   |
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|
|   |
|
|   |   |   |
|
|   |
|   |
|
|
|
|
|
|   |   |   |   |
|   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|
|   |   |
|
|   |   |   |
|
|
|
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   | . | . | . | . |
|   |   |
|   |   |   |
|   |   |
|   |   |
| . | . | . |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |
Template Sequence |   |
I | G | I | I | G | G | . |
. |
. |
. |
G | S | V | G | L | L | C | A | Y | Y | L | S | L | Y | . |
. |
. |
H | D | V | T | V | V | T | R | R | Q | E | Q | A | A | A | I | Q | S | E | G | I | R | L | Y | K | G | G | E | E | F | R | A | D | C | S | A | D | T | S | I | N | S | D | F | D | L | L | V | V | T | V | K | Q |
Template Known Secondary structure |   |
 |  |  |  |
|
| . | . | . | . | S |  |  |  |  |  |  |  |  |  |  | T | T | T | . | . | . | S |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  | T | T |  |  |  |  |  |
|
|  |  |  | S | S |
|
| S |
|
| S |  |  |  |  |
|
|
| G |
Template Predicted Secondary structure |   |
 |  |  |  |
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | |
|
|
|
. | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
|
|
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
  |
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | R | N | L | A | L | L | E | E | L | G | E | K | G | C | K | T | C | I | I | L | S | A | P | A | S | Q | H | E | D | L | R | A |
Query Conservation |   |
  |   |
|   |   |   |
|   |
|   |   |   |   |
|
|
|   |
|
|
|   |
|   |
|
|   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
H | Q | L | Q | S | V | F | S | S | L | E | R | I | G | K | T | N | I | L | F | L | Q | N | G | M | G | H | I | H | D | L | K | D |
Template Known Secondary structure |   |
G | G |  |  |  |  |  |  |  |  |  | T | S |
| S |
|  |  |  |  |
|
| S | S | S |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|