Job Description P76594 Confidence 97.57% Date Thu Jan 5 12:24:56 GMT 2012 Rank 231 Aligned Residues 120 % Identity 23% Template c3e5nA_ PDB info PDB header:ligase Chain: A: PDB Molecule:d-alanine-d-alanine ligase a; PDBTitle: crystal strucutre of d-alanine-d-alanine ligase from2 xanthomonas oryzae pv. oryzae kacc10331 Resolution 2.00 Å

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		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	R	R	L	F	S	E	A	G	L	P	T	Y	R	T	P	E	G	T	I	T	A	F	M	H	M	V	E	Y	R	R	N	Q	K	Q	L	R	E	T	P	A	L	P	S	N	L	T	S	N	T	A	E	A	H	L	L	L	Q	Q	A	I	A	E	G	A	T	S	L	D	T	H	E	V	Q	P	I	L	Q	A
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	Q	G	L	L	R	M	A	N	L	P	F	V	G	S	G	V	L	G	S	A	V	A	M	D	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	A	K	R	V	L	R	D
Template Known Secondary structure										T	T			B	S	S											B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.																																													.	.	.	.	.	.	.	150
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.					.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.
Query SS confidence																		.	.	.	.
Query Sequence		Y	G	M	N	T	L	P	T	W	I	A	S	D	S	T	E	.	.	.	.	A	V	H	I	A	E	Q	I	G	Y	P	V	A	L	K	L	R	S	P	D	I	P	H	K	S	E	V	Q	G	V	M	L	Y	L	R	T	A	N	E	V	Q	Q	A	A	N	A	I	F	D	R	V	K	M	A	W	P	Q	A	R	V
Query Conservation																		.	.	.	.
Alig confidence																		.	.	.	.																	.	.	.	.	.												.															.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.												.															.	.	.	.	.	.	.	.	.
Template Sequence		A	R	L	A	V	A	P	F	V	C	F	D	R	H	T	A	A	H	A	D	V	D	T	L	I	A	Q	L	G	L	P	L	F	V	K	P	.	.	.	.	.	A	N	Q	G	S	S	V	G	V	S	Q	.	V	R	T	A	D	A	F	A	A	A	L	A	L	A	.	.	.	.	.	.	.	.	.	L	A	Y	D
Template Known Secondary structure		T	T			B												T	T												S	S						.	.	.	.	.	S	B	S		S	S	T	T				.			S	G	G	G									.	.	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																																						.	.	.	.	.												.															.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.						.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.										.	.	.	.
		569	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	L	L	V	Q	S	M	A	N	R	A	G	A	Q	E	L	R	V	V	V	E	H	D	P	V
Query Conservation
Alig confidence											.	.	.
Template Conservation											.	.	.
Template Sequence		H	K	V	L	V	E	A	A	V	.	.	.	A	G	R	E	I	E	C	A	V	L	G	N	A	V
Template Known Secondary structure		S									.	.	.		S										S	S	S
Template Predicted Secondary structure											.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.				.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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