Job Description P76594 Confidence 95.68% Date Thu Jan 5 12:24:56 GMT 2012 Rank 387 Aligned Residues 152 % Identity 16% Template c3do5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: crystal structure of putative homoserine dehydrogenase (np_069768.1)2 from archaeoglobus fulgidus at 2.20 a resolution Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.									.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																	60	.	.	.	.	.	.			.
Predicted Secondary structure																											.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Query SS confidence																											.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Query Sequence		S	I	A	V	I	G	A	S	M	K	P	N	R	A	G	Y	L	M	M	R	N	L	L	A	G	.	.	.	.	.	.	.	.	G	F	N	G	P	V	L	P	V	T	P	A	W	K	A	V	L	G	V	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	P	D	I	A	S	L	.	.	P
Query Conservation																											.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Alig confidence									.	.	.	.															.	.	.	.	.	.	.	.		.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Conservation									.	.	.	.																								.
Template Sequence		K	I	A	I	V	G	F	.	.	.	.	G	T	V	G	Q	G	V	A	E	L	L	I	R	K	R	E	E	I	E	K	A	I	G	.	E	F	K	V	T	A	V	A	D	S	K	S	S	I	S	G	D	F	S	L	V	E	A	L	R	X	K	R	E	T	G	X	L	R	D	D	A	K	A	I	E	V	V	R	S
Template Known Secondary structure									.	.	.	.	S													T										.										S	S					S	S														S	S		S	B
Template Predicted Secondary structure									.	.	.	.																								.
Template SS confidence
		3	.	.	.	.	.	.					10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		F	T	P	D	L	A	V	L	C	T	N	A	S	R	N	L	A	L	L	E	E	L	G	E	K	G	C	K	T	C	I	I	L	S	A	P	A	S	Q	.	H	E	D	L	R	A	C	A	L	R	H	N	M	R	L	L	G	P	N	S	L	G	L	L	A	P	W	Q	G	L	N	A	S	F	S	P	V	P	I	K
Query Conservation																																									.
Alig confidence																																									.																														.	.	.							.
Template Conservation																																																																							.	.	.							.
Template Sequence		A	D	Y	D	V	L	I	E	A	S	V	T	R	E	G	V	N	Y	I	R	E	A	L	K	R	G	K	H	V	V	T	S	N	K	G	P	L	V	A	E	F	H	G	L	X	S	L	A	E	R	N	G	V	R	L	X	Y	E	A	T	V	G	G	A	X	P	V	V	K	.	.	.	L	A	K	R	Y	L	.	A
Template Known Secondary structure		S			S																				T	T	T								S																	T	T						G	G	G	S	S	T	T	S					.	.	.				T	T	T	.	T
Template Predicted Secondary structure																																																																							.	.	.							.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.				.	.	.	150	.	.		.
		147	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		R	G	K	L	A	F	I	S	.	.	Q	S	A	A	V	S	N	T	I	L	D	W	A	Q	Q	R	K	M	G	F	S
Query Conservation										.	.
Alig confidence										.	.					.
Template Conservation																.
Template Sequence		L	C	E	I	E	S	V	K	G	I	F	N	G	T	.	C	N	Y	I	L	S	R	X	E	E	E	R	L	P	Y	E
Template Known Secondary structure		T	S													.
Template Predicted Secondary structure																.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions