 |
Job Description | P76594 | Confidence | 98.04% | Date | Thu Jan 5 12:24:56 GMT 2012 |
Rank | 201 | Aligned Residues | 77 |
% Identity | 12% | Template | c3dnsA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:ribosomal-protein-alanine acetyltransferase; |
PDBTitle: the n-terminal domain of ribosomal-protein-alanine acetyltransferase2 from clostridium acetobutylicum atcc 824
|
Resolution | 2.10 Å |
|
 |
  |   |
788 | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | |
. | . | . | . | . | . | . | . | 810 | . | |
. | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | |
. | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|  |  |  |  |  | . |  |  |  |
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | Q | T | E | E | I | L | G | V | T | R | A | I | S | . |
D | P | D | N | I | D | A | E | F | A | . |
V | L | V | R | S | D | L | K | G | L | G | L | G | R | R | L | M | E | K | L | I | T | Y | T | . |
R | D | H | G | L | Q | R | L | N | G | I | T | M | P | N | N | R | G | M | V | A | L | A | R | K | L | G | F | N |
Query Conservation |   |
  |   |   |   |   |   |   |
|
|   |
|   |   |   | . |   |   |
|   |   |   |   |
|
|
| . |
|   |
|   |   |   |   |
|
|   |
|
|
|   |   |
|
|   |   |   |
|   |   |
| . |
|   |   |
|   |   |   |   |   |
|   |
|
|   |   |
|   |   |
|   |   |
|   |   |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|
|   |
|   |
|   |   |
|
|   |   |
|   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |
|
|
|   |   |   |
|
|   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|
|   | . | . |
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |
|
|   |
Template Sequence |   |
D | K | Y | G | I | T | I | G | R | I | F | I | V | D | L | N | K | D | N | R | F | C | X | F | R | X | K | I | Y | K | Q | G | K | S | I | N | T | Y | I | K | E | I | L | S | V | F | X | E | F | L | F | K | S | N | D | I | N | K | V | N | . |
. |
I | I | V | D | E | E | V | S | T | Q | P | F | V | E | L | G | F | A |
Template Known Secondary structure |   |
 | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  |
|
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| S |  |  |  | . | . |  |  |  |  | T | T | S |
| S |  |  |  |  |  | T | T |
|  |
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  | . | . |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | |
|
. | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
  |
  |   |
865 | . |
Predicted Secondary structure |   |
 |  |
Query SS confidence |   |
|
|
Query Sequence |   |
V | D |
Query Conservation |   |
  |   |
Alig confidence |   |
|
|
Template Conservation |   |
  |
|
Template Sequence |   |
F | E |
Template Known Secondary structure |   |
 |  |
Template Predicted Secondary structure |   |
 |  |
Template SS confidence |   |
|
|
  |   |
101 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|