Job Description P76594 Confidence 96.99% Date Thu Jan 5 12:24:56 GMT 2012 Rank 294 Aligned Residues 89 % Identity 16% Template c2zdqA_ PDB info PDB header:ligase Chain: A: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: crystal structure of d-alanine:d-alanine ligase with atp2 and d-alanine:d-alanine from thermus thermophius hb8 Resolution 2.30 Å

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		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	V	Q	P	I	L	Q	A	Y	G	M	N	T	L	P	T	W	I	A	S	D	S	T	E	A	V	H	I	A	E	Q	I	G	Y	P	V	A	L	K	L	R	S	P	D	I	P	H	K	S	E	V	Q	G	V	M	L	Y	L	R	T	A	N	E	V	Q	Q	A	A	N	A	I	F	D	R	V	K	M	A	W
Query Conservation
Alig confidence																											.	.	.														.	.	.	.	.												.															.	.	.	.	.	.	.	.
Template Conservation																											.	.	.														.	.	.	.	.												.															.	.	.	.	.	.	.	.
Template Sequence		D	L	S	K	R	V	L	A	Q	A	G	V	P	V	V	P	W	V	A	V	R	K	G	E	P	.	.	.	P	V	V	P	F	D	P	P	F	F	V	K	P	.	.	.	.	.	A	N	T	G	S	S	V	G	I	S	R	.	V	E	R	F	Q	D	L	E	A	A	L	A	L	A	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T											T	T	S		.	.	.					S		S							.	.	.	.	.	T	T			T	T	T	T				.			S	G	G	G									.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.														.	.	.	.	.												.															.	.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.						.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.
		564	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	A	R	V	H	G	L	L	V	Q	S	M	A	N	R	A	G	A	Q	E	L	R	V	V	V	E	H	D
Query Conservation
Alig confidence		.														.	.
Template Conservation		.														.	.
Template Sequence		.	F	R	Y	D	E	K	A	V	V	E	K	A	L	.	.	S	P	V	R	E	L	E	V	G	V	L	G	N
Template Known Secondary structure		.	T	T	T		S									.	.	S	S										S	S
Template Predicted Secondary structure		.														.	.
Template SS confidence
			180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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