Job Description P76594 Confidence 100.00% Date Thu Jan 5 12:24:56 GMT 2012 Rank 5 Aligned Residues 257 % Identity 21% Template c2yv2A_ PDB info PDB header:ligase Chain: A: PDB Molecule:succinyl-coa synthetase alpha chain; PDBTitle: crystal structure of succinyl-coa synthetase alpha chain from2 aeropyrum pernix k1 Resolution 2.20 Å

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		9	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure								.																																						.	.																		.	.	.
Query SS confidence								.																																						.	.																		.	.	.
Query Sequence		L	L	R	P	K	S	.	I	A	V	I	G	A	S	M	K	P	N	R	A	G	Y	L	M	M	R	N	L	L	A	G	G	F	N	G	P	V	L	P	V	T	P	A	W	.	.	K	A	V	L	G	V	L	A	W	P	D	I	A	S	L	P	F	.	.	.	T	P	D	L	A	V	L	C	T	N	A	S	R	N
Query Conservation								.																																						.	.																		.	.	.
Alig confidence								.																						.	.	.					.									.	.																		.	.	.
Template Conservation																														.	.	.					.
Template Sequence		L	V	D	S	E	T	R	V	L	V	Q	G	I	T	G	R	E	G	S	F	H	A	K	A	M	L	E	Y	.	.	.	G	T	K	V	.	V	A	G	V	T	P	G	K	G	G	S	E	V	H	G	V	P	V	Y	D	S	V	K	E	A	L	A	E	H	P	E	I	N	T	S	I	V	F	V	P	A	P	F	A
Template Known Secondary structure				S	T	T							T	T	T	S														.	.	.	T				.						T	T		T	T				T	T					S	S									T	T										G	G	G
Template Predicted Secondary structure																														.	.	.					.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		L	A	L	L	E	E	L	G	E	K	G	C	K	T	C	I	I	L	S	A	P	A	S	Q	.	.	H	E	D	L	R	A	C	A	L	R	H	N	M	R	L	L	G	P	N	S	L	G	L	L	A	P	W	Q	G	L	N	A	S	F	S	P	V	P	I	K	R	G	K	L	A	F	I	S	Q	S	A	A	V	S
Query Conservation																										.	.
Alig confidence																										.	.
Template Conservation
Template Sequence		P	D	A	V	Y	E	A	V	D	A	G	I	R	L	V	V	V	I	T	E	G	I	P	V	H	D	T	M	R	F	V	N	Y	A	R	Q	K	G	A	T	I	I	G	P	N	C	P	G	A	I	T	P	G	Q	A	K	V	G	I	M	P	G	H	I	F	K	E	G	G	V	A	V	V	S	R	S	G	T	L	T
Template Known Secondary structure											T	T		S																									T						S	S	S						T	T	T					S			G	G	G											S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.																														.
Query SS confidence																										.	.																														.
Query Sequence		N	T	I	L	D	W	A	Q	Q	R	K	M	G	F	S	Y	F	I	A	L	G	D	S	L	.	.	D	I	D	V	D	E	L	L	D	Y	L	A	R	D	S	K	T	S	A	I	L	L	Y	L	E	Q	L	S	D	.	A	R	R	F	V	S	A	A	R	S	A	S	R	N	K	P	I	L	V	I	K	S	G	R
Query Conservation																										.	.																														.
Alig confidence																										.	.																														.
Template Conservation
Template Sequence		Y	E	I	S	Y	M	L	T	R	Q	G	I	G	Q	S	T	V	I	G	I	G	G	D	P	I	V	G	L	S	F	T	E	A	L	K	L	F	Q	E	D	P	Q	T	E	A	L	V	L	I	G	E	I	G	G	D	M	E	E	R	A	A	E	M	I	K	K	G	E	F	T	K	P	V	I	A	Y	I	A	G	R
Template Known Secondary structure											T	T											S	S	S	S		S	S											T		T	T		S								S	S	S	S											T	T	S			S							S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	A	A	Q	R	L	L	N	T	T	A	G	M	D	P	A	W	D	A	A	I	Q	R	A	G	L	L	R	V	Q	D	T	H	E	L	F	S	A	V	E	T	L
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	.	.	.	.	.	.	.	.	.	.	.	G	T	Y	E	G	K	V	K	A	L	R	E	A	G	V	E	V	A	E	T	P	F	E	V	P	E	L	V	R	K	A
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.		S										T	T	T					S	S	G	G	G
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		263												.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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