Job Description P76594 Confidence 100.00% Date Thu Jan 5 12:24:56 GMT 2012 Rank 7 Aligned Residues 251 % Identity 21% Template c2yv1A_ PDB info PDB header:ligase Chain: A: PDB Molecule:succinyl-coa ligase [adp-forming] subunit alpha; PDBTitle: crystal structure of succinyl-coa synthetase alpha chain from2 methanocaldococcus jannaschii dsm 2661 Resolution 1.70 Å

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		9	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure								.																																						.	.																			.	.
Query SS confidence								.																																						.	.																			.	.
Query Sequence		L	L	R	P	K	S	.	I	A	V	I	G	A	S	M	K	P	N	R	A	G	Y	L	M	M	R	N	L	L	A	G	G	F	N	G	P	V	L	P	V	T	P	A	W	.	.	K	A	V	L	G	V	L	A	W	P	D	I	A	S	L	P	F	T	.	.	P	D	L	A	V	L	C	T	N	A	S	R	N	L
Query Conservation								.																																						.	.																			.	.
Alig confidence								.								.	.	.																		.										.	.																			.	.
Template Conservation																.	.	.																		.
Template Sequence		L	L	D	E	N	T	K	A	I	V	Q	G	I	T	.	.	.	G	R	Q	G	S	F	H	T	K	K	M	L	E	C	G	T	K	.	I	V	G	G	V	T	P	G	K	G	G	Q	N	V	H	G	V	P	V	F	D	T	V	K	E	A	V	K	E	T	D	A	N	A	S	V	I	F	V	P	A	P	F	A	K
Template Known Secondary structure		S	S		T	T							T	T	T	.	.	.	S													T	T			.							T	T		T	T				T	T					S	S
Template Predicted Secondary structure																.	.	.																		.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		A	L	L	E	E	L	G	E	K	G	C	K	T	C	I	I	L	S	A	P	A	S	Q	.	.	H	E	D	L	R	A	C	A	L	R	H	N	M	R	L	L	G	P	N	S	L	G	L	L	A	P	W	Q	G	L	N	A	S	F	S	P	V	P	I	K	R	G	K	L	A	F	I	S	Q	S	A	A	V	S	N
Query Conservation																									.	.
Alig confidence																									.	.
Template Conservation
Template Sequence		D	A	V	F	E	A	I	D	A	G	I	E	L	I	V	V	I	T	E	H	I	P	V	H	D	T	M	E	F	V	N	Y	A	E	D	V	G	V	K	I	I	G	P	N	T	P	G	I	A	S	P	K	V	G	K	L	G	I	I	P	M	E	V	L	K	E	G	S	V	G	M	V	S	R	S	G	T	L	T	Y
Template Known Secondary structure										T	T		S							S																		T						S	S							T	T	T								G	G	G											S		S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.																																									.
Query SS confidence																											.	.																																									.
Query Sequence		T	I	L	D	W	A	Q	Q	R	K	M	G	F	S	Y	F	I	A	L	G	D	S	L	D	I	.	.	D	V	D	E	L	L	D	Y	L	A	R	D	S	K	T	S	A	I	L	L	Y	L	E	Q	L	S	D	A	R	R	F	V	S	A	A	R	S	A	S	R	.	N	K	P	I	L	V	I	K	S	G	R	S
Query Conservation																											.	.																																									.
Alig confidence																											.	.																													.	.											.
Template Conservation																																																									.	.
Template Sequence		E	I	A	H	Q	I	K	K	A	G	F	G	V	S	T	C	V	G	I	G	G	D	P	I	V	G	L	R	Y	K	E	V	L	D	L	F	E	K	D	D	E	T	E	A	I	V	M	I	G	E	I	G	G	G	A	.	.	E	E	E	A	A	K	F	I	E	K	M	K	K	P	V	I	G	Y	I	A	G	Q	G
Template Known Secondary structure										T	T											S	S	S	S		S	S											T		T	T		S								S	S	S	S		.	.									T	T		S	S
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		239					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure			.	.	.	.
Query SS confidence			.	.	.	.
Query Sequence		P	.	.	.	.	A	A	Q	R	L	L	N	T	T	A	G	M	D	P	A	W	D	A	A	I	Q	R	A	G	L	L
Query Conservation			.	.	.	.
Alig confidence			.	.	.	.
Template Conservation
Template Sequence		T	A	E	S	K	M	K	A	L	E	E	A	G	A	Y	V	A	K	N	I	S	D	I	P	K	L	L	A	G	I	L
Template Known Secondary structure														T					S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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