Job Description P76594 Confidence 92.99% Date Thu Jan 5 12:24:56 GMT 2012 Rank 448 Aligned Residues 181 % Identity 13% Template c2vrcD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:triphenylmethane reductase; PDBTitle: crystal structure of the citrobacter sp. triphenylmethane2 reductase complexed with nadp(h) Resolution 2.5 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.													.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Query Sequence		S	I	A	V	I	G	A	S	M	K	P	N	R	A	G	Y	L	M	M	R	N	L	L	A	G	G	F	N	G	P	V	L	P	V	T	P	A	W	K	A	V	.	.	.	.	.	.	.	.	.	.	.	.	L	G	V	L	A	W	P	D	I	A	S	L	P	F	T	P	D	L	A	V	L	C	T	N	.	.	.
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Alig confidence										.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation										.	.	.
Template Sequence		S	I	A	V	T	G	A	T	.	.	.	G	Q	L	G	G	L	V	I	Q	H	L	X	A	A	V	P	A	S	Q	I	I	A	I	V	R	N	V	E	K	A	S	T	L	A	D	Q	G	V	E	V	R	H	G	D	Y	N	Q	P	E	S	L	Q	K	A	F	A	G	V	S	K	L	L	F	I	S	G	P	H	Y
Template Known Secondary structure							S	T	T	.	.	.	S														S		G	G	G						S	S	G	G	G	G						T	T								T	T		G	G	G						T	T		S
Template Predicted Secondary structure										.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.				10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
							79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.														.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure		.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	A	S	R	N	L	A	L	L	E	E	L	G	E	K	G	C	K	T	C	I	I	L	S	A	P	A	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	H	E	D	L	R	A	C	A	L	R	H	N	M	R	L	L	G	P	N	S	L	G	L	L	A	P	W	Q	G	L	N	A	S	F
Query Conservation		.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	N	T	L	L	I	V	Q	H	A	N	V	V	K	A	A	R	D	A	G	V	K	H	I	A	Y	T	G	Y	A	F	A	E	E	S	I	I	P	L	A	H	V	H	L	A	T	E	Y	A	T	R	T	T	N	I	P	Y	T	F	L	R	N	A	L	Y	T	D	F	F	V	N	E	G	L	R	A	S	T	E	S
Template Known Secondary structure																				T	T		S								T	T	G	G	G		S	S															T	T	T											B	S	T	T	T	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	V	P	I	K	R	G	K	L	A	F	I	S	Q	S	A	A	V	S	N	T	I	L	D	W	A	Q	Q	R	K	M	G	F	S	Y	F	I	A	L	G	D	S	L	D	I	D	V	D	E	L	L	D	Y	L	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	I	V	T	N	A	G	S	G	I	V	N	S	V	T	R	N	E	L	A	L	A	A	A	T	V	L	T	E	E	G	H	E	N	K	T	Y	N	L	V	S	N	Q	P	W	T	F	D	E	L	A	Q	I	L	S	E
Template Known Secondary structure		S					S		T	T			B			B														T	S	S	S		T	T								S	S		B
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions