Job Description P76594 Confidence 95.96% Date Thu Jan 5 12:24:56 GMT 2012 Rank 371 Aligned Residues 112 % Identity 19% Template c2uyyD_ PDB info PDB header:cytokine Chain: D: PDB Molecule:n-pac protein; PDBTitle: structure of the cytokine-like nuclear factor n-pac Resolution 2.5 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.
Query SS confidence																																														.	.	.	.	.
Query Sequence		R	P	K	S	I	A	V	I	G	A	S	M	K	P	N	R	A	G	Y	L	M	M	R	N	L	L	A	G	G	F	N	G	P	V	L	P	V	T	P	A	W	K	A	V	.	.	.	.	.	L	G	V	L	A	W	P	D	I	A	S	L	P	F	T	P	D	L	A	V	L	C	T	N	A	S	R	N	L	A	L
Query Conservation																																														.	.	.	.	.
Alig confidence												.	.	.	.																	.	.													.	.	.	.	.
Template Conservation												.	.	.	.																	.	.
Template Sequence		T	D	K	K	I	G	F	L	G	L	.	.	.	.	G	L	M	G	S	G	I	V	S	N	L	L	K	M	G	H	.	.	T	V	T	V	W	N	R	T	A	E	K	C	D	L	F	I	Q	E	G	A	R	L	G	R	T	P	A	E	V	V	S	T	C	D	I	T	F	A	C	V	S	D	P	K	A	A	K	D
Template Known Secondary structure			S	S								.	.	.	.	S													T	T		.	.							S	S	G	G	G	G						T	T					S										S							S	S
Template Predicted Secondary structure												.	.	.	.																	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.					.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		86	.	.						.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.																			.	.
Query SS confidence					.	.	.	.	.																			.	.
Query Sequence		L	E	E	.	.	.	.	.	L	G	E	K	G	C	K	T	C	I	I	L	S	A	P	A	S	Q	.	.	H	E	D	L	R	A	C	A	L	R	H	N	M	R	L	L	G	P	N	S	L	G
Query Conservation					.	.	.	.	.																			.	.
Alig confidence					.	.	.	.	.																			.	.
Template Conservation
Template Sequence		L	V	L	G	P	S	G	V	L	Q	G	I	R	P	G	K	C	Y	V	D	M	S	T	V	D	A	D	T	V	T	E	L	A	Q	V	I	V	S	R	G	G	R	F	L	E	A	P	V	S	G
Template Known Secondary structure					S	T	T		G	G	G	G			T	T							S																	T	T										S
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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