Job Description P76594 Confidence 93.74% Date Thu Jan 5 12:24:56 GMT 2012 Rank 431 Aligned Residues 111 % Identity 13% Template c2ph5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:homospermidine synthase; PDBTitle: crystal structure of the homospermidine synthase hss from legionella2 pneumophila in complex with nad, northeast structural genomics target3 lgr54 Resolution 2.50 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.																50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																												.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	K	S	I	A	V	I	G	A	S	M	K	P	N	R	A	G	Y	L	M	M	R	N	L	L	A	.	.	G	G	F	N	G	P	V	L	P	V	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	W	K	A	V	L	G	V	L	A	W	P	D	I	A	S	L	P	F	T	P	D	L	A	V
Query Conservation																												.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.														.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.
Template Sequence		K	N	R	F	V	I	L	G	F	.	.	.	.	G	C	V	G	Q	A	L	X	P	L	I	F	E	K	F	D	I	K	P	S	Q	V	T	I	I	A	A	E	G	T	K	V	D	V	A	Q	Q	Y	G	V	S	F	K	L	Q	Q	I	T	P	Q	N	Y	L	E	V	I	G	S	T	L	E	E	N	D	F	L	I
Template Known Secondary structure			S								.	.	.	.	S														B				G	G	G						S	S			S								T										T	T	T					T	G	G	G			T	T
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.								.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.														.
Query SS confidence																																		.	.	.	.	.	.	.														.
Query Sequence		L	C	T	N	A	S	R	N	L	A	L	L	E	E	L	G	E	K	G	C	K	T	C	I	I	L	S	A	P	A	S	Q	.	.	.	.	.	.	.	H	E	D	L	R	A	C	A	L	R	H	N	M	.	R	L	L	G	P	N	S
Query Conservation																																		.	.	.	.	.	.	.														.
Alig confidence																																		.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		D	V	S	I	G	I	S	S	L	A	L	I	I	L	C	N	Q	K	G	A	L	Y	I	N	A	A	T	E	P	W	K	E	R	R	T	N	Y	S	L	R	E	E	V	L	R	L	K	D	K	T	Q	K	T	A	L	I	T	H	G	A
Template Known Secondary structure					S	S	S													T						S	S																			T	T	T	T	T			S					S		B	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions