Job Description P76594 Confidence 97.47% Date Thu Jan 5 12:24:56 GMT 2012 Rank 245 Aligned Residues 170 % Identity 11% Template c2p0aA_ PDB info PDB header:neuropeptide Chain: A: PDB Molecule:synapsin-3; PDBTitle: the crystal structure of human synapsin iii (syn3) in complex with2 amppnp Resolution 1.90 Å

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		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	W	C	G	E	H	S	S	Q	E	A	R	R	L	F	S	E	A	G	L	P	T	Y	R	T	P	E	G	T	I	T	A	F	M	H	M	V	E	Y	R	R	N	Q	K	Q	L	R	E	T	P	A	L	P	S	N	L	T	S	N	T	A	E	A	H	L	L	L	Q	Q	A	I	A	E	G	A	T	S	L	D
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	S	M	A	L	G	E	D	Y	R	S	L	V	I	G	L	Q	Y	G	G	L	P	A	V	N	S	L	Y	S	V	Y	N	F	C	S	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				G	G	G	T													T	T					S								T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.					.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.
Query SS confidence																																				.	.	.	.
Query Sequence		T	H	E	V	Q	P	I	L	Q	A	Y	G	M	N	T	L	P	T	W	I	A	S	D	S	T	E	A	V	H	I	A	E	Q	I	.	.	.	.	G	Y	P	V	A	L	K	L	R	S	P	D	I	P	H	K	S	E	V	Q	G	V	M	L	Y	L	R	T	A	N	E	V	Q	Q	A	A	N	A	I	F	D	R
Query Conservation																																				.	.	.	.
Alig confidence		.	.																																	.	.	.	.									.	.	.	.	.												.
Template Conservation		.	.																																													.	.	.	.	.												.
Template Sequence		.	.	W	V	F	S	Q	L	I	K	I	F	H	S	L	G	P	E	K	F	P	L	V	E	Q	T	F	F	P	N	H	K	P	M	V	T	A	P	H	F	P	V	V	V	K	L	.	.	.	.	.	G	H	A	H	A	G	M	G	K	I	K	.	V	E	N	Q	L	D	F	Q	D	I	T	S	V	V	A	M	A
Template Known Secondary structure		.	.															T	T	T	S		B							S	S	S	T	T					S	S	S	S						.	.	.	.	.	S	S			T	T	T	T				.			S
Template Predicted Secondary structure		.	.																																													.	.	.	.	.												.
Template SS confidence
				206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.						250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		559	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	M	A	W	P	Q	A	R	V	H	G	L	L	V	Q	S	M	A	N	R	A	G	A	Q	E	L	R	V	V	V	E	H	D	P	V	F	G	P	L	I	M	L	G	E	G	G	V	E	W	R	P	E	D	Q	A	V	V	A	L	P	P	L	N	M	N	L	A	R	Y	L	V	I	Q	G	I	K
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.								.	.															.
Template Conservation					.	.	.	.	.	.	.	.	.								.	.															.
Template Sequence		K	T	Y	.	.	.	.	.	.	.	.	.	A	T	T	E	A	F	I	.	.	D	S	K	Y	D	I	R	I	Q	K	I	G	S	N	.	Y	K	A	Y	M	R	T	S	I	S	G	N	W	K	A	N	T	G	S	A	M	L	E	Q	V	A	M	T	E	R	Y	R	L	W	V	D	S	C	S	E	M
Template Known Secondary structure		T			.	.	.	.	.	.	.	.	.								.	.												T	T		.									S	S	S		S	S	T	T	S	S	S																				T	T	G
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.								.	.															.
Template SS confidence
		278	.	280										.	.	.	.	.	.	.			.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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