Job Description P76594 Confidence 98.97% Date Thu Jan 5 12:24:56 GMT 2012 Rank 107 Aligned Residues 289 % Identity 15% Template c2hjwA_ PDB info PDB header:ligase Chain: A: PDB Molecule:acetyl-coa carboxylase 2; PDBTitle: crystal structure of the bc domain of acc2 Resolution 2.50 Å

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		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	S	N	G	A	A	P	A	A	L	A	L	D	A	L	W	S	R	N	G	K	L	A	T	L	S	E	E	T	C	Q	K	L	R	D	A	L	P	E	H	V	A	I	S	N	P	L	D	L	R	D	D	A	S	S	E	H	Y	I	K	T	L	D	I	L	L	H	S	Q	D	F	D	A	L	M	V	I	H	S
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template Sequence		L	I	A	N	N	G	I	A	A	V	K	C	M	R	S	I	R	R	W	A	Y	E	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	N	E	R	A	I	R	F	V	V	M	V	T	P	E	D	L	K	A	N	A	E	Y	I	K	M	A	D	H	.	.	.	.	.	Y	V	P	V	P
Template Known Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S		T	T	S	S													T	T							S	S		.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.																		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.						.	.	.	320	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	A	A	A	P	A	T	E	S	A	Q	V	L	I	E	A	V	K	H	H	P	R	S	K	Y	V	S	L	L	T	N	W	C	G	E	H	S	S	Q	E	A	R	R	L	F	S	E	A	G	L	P	T	Y	R	T	P	E	G	T	I	T	A	F	M	H	M	V	E	Y	R	R	N	Q	K	Q	L	R	E	T
Query Conservation
Alig confidence																											.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	P	N	N	N	N	Y	A	N	V	E	L	I	V	D	I	A	K	R	I	P	V	Q	A	.	.	.	V	W	A	G	W	G	H	A	S	E	N	P	K	L	P	E	L	L	C	K	N	G	V	A	F	L	G	P	P	S	E	A	M	W	A	L	G	D	K	I	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	S	G	G	G	T	T	T												T	T		S		.	.	.					S	S	T	T	T	T		T									T	T				S	S								T	T		S			.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.				.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500																								.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	A	L	P	S	N	L	T	S	N	T	A	E	A	H	L	L	L	Q	Q	A	I	A	E	G	A	T	S	L	D	T	H	E	V	Q	P	I	L	Q	A	Y	G	M	N	T	L	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	I	A	S	D	S	T	E	A
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	T	V	V	A	Q	T	L	Q	V	P	T	L	P	W	S	G	S	G	L	T	V	E	W	Q	G	K	R	I	S	V	P	E	D	V	Y	D	K	G	C	V	K	D	V	D	E	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T			B			B	T	T	T	T																		T	T	S	S			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	I	A	E	Q	I	G	Y	P	V	A	L	K	L	R	S	P	D	I	P	H	K	S	E	V	Q	G	V	M	L	Y	L	R	T	A	N	E	V	Q	Q	A	A	N	A	I	F	D	R	V	K	M	A	W	P	Q	A	R	V	H	G	L	L	V	Q	S	M	A	N	R	A	G	A	Q	E	L	R	V	V	V
Query Conservation
Alig confidence																	.	.	.	.	.												.																							.	.	.	.	.	.	.								.	.
Template Conservation																	.	.	.	.	.												.																							.	.	.	.	.	.	.								.	.
Template Sequence		L	E	A	A	E	R	I	G	F	P	L	M	I	K	A	.	.	.	.	.	S	E	G	G	G	G	K	G	I	R	K	.	A	E	S	A	E	D	F	P	I	L	F	R	Q	V	Q	S	E	I	P	G	S	P	.	.	.	.	.	.	.	I	F	L	M	K	L	A	.	.	Q	H	A	R	H	L	E	V	Q	I
Template Known Secondary structure										S	S						.	.	.	.	.	T	T			S	S		S				.			S	T	T	T												S	T	T			.	.	.	.	.	.	.								.	.		S
Template Predicted Secondary structure																	.	.	.	.	.												.																							.	.	.	.	.	.	.								.	.
Template SS confidence
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.						.	.	.	.	460	.	.	.	.	.	.		.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.								.	490	.	.	.	.	.			.	.	.	.	500	.	.	.	.	.
		590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620			.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		E	H	D	P	V	F	G	P	L	I	M	L	G	E	G	G	V	E	W	R	P	E	D	Q	A	V	V	A	L	P	P	.	.	L	N	M	N	L	A	R	Y	L	V	I	Q	G	I	K	S	K	K	I	R	A	R	S	A	L	R	P	L	D	V	A	G	L	S	Q	L	L	V	Q	V	S	N	L	I	V	D	C
Query Conservation																																	.	.
Alig confidence																																	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	D	Q	Y	G	N	A	V	S	L	F	G	R	D	C	S	I	Q	R	R	H	Q	K	I	V	E	E	A	P	A	T	I	A	P	L	A	I	F	E	F	M	E	Q	C	A	I	R	L	A	K	T	V	G	Y	V	S	A	G	T	V	E	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	Y	S	Q	D
Template Known Secondary structure					S	S	S														S	S	S	S							S			S	S																			T	T									.	.	.	.	.	.	.	.	.	.	.	.					S	S
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		506	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.													.	.	570	.	.	.
		668	.	670	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	I	Q	R	L	D	I	H	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	F	H	F	L	E	L	N	P
Template Known Secondary structure		S									S
Template Predicted Secondary structure
Template SS confidence
		574	.	.	.	.	.	580	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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