Job Description P76594 Confidence 98.75% Date Thu Jan 5 12:24:56 GMT 2012 Rank 138 Aligned Residues 263 % Identity 14% Template c2dwcB_ PDB info PDB header:transferase Chain: B: PDB Molecule:433aa long hypothetical phosphoribosylglycinamide formyl PDBTitle: crystal structure of probable phosphoribosylglycinamide formyl2 transferase from pyrococcus horikoshii ot3 complexed with adp Resolution 1.70 Å

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		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	G	D	R	L	M	I	I	S	N	G	A	A	P	A	A	L	A	L	D	A	L	W	S	R	N	G	K	L	A	T	L	S	E	E	T	C	Q	K	L	R	D	A	L	P	E	H	V	A	I	S	N	P	L	D	L	R	D	D	A	S	S	E	H	Y	I	K	T	L	D	I	L	L	H	S	Q	D	F	D
Query Conservation
Alig confidence											.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	S	A	Q	K	I	L	L	L	.	G	S	G	E	L	G	K	E	I	A	I	E	A	Q	R	L	G	V	E	V	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	R	Y	A	N	A	P	A	M	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	A	H
Template Known Secondary structure		T	T								.	S		S													T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	T	T							.	.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure											.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.																							.	.	50	.	.	.	.	.	.	.	.	.													60	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	M	V	I	H	S	P	S	A	A	A	P	A	T	E	S	A	Q	V	L	I	E	A	V	K	H	H	P	R	S	K	Y	V	S	L	L	T	N	W	C	G	E	H	S	S	Q	E	A	R	R	L	F	S	E	A	G	L	P	T	Y	R	T	P	E	G	T	I	T	A	F	M	H	M	V	E	Y	R	R	N
Query Conservation
Alig confidence						.	.	.	.																	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.
Template Conservation						.	.	.	.																	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.
Template Sequence		R	S	Y	V	.	.	.	.	G	N	M	M	D	K	D	F	L	W	S	V	V	E	R	E	.	.	.	.	.	.	.	.	.	K	P	D	A	I	I	P	E	I	E	A	I	N	L	D	A	L	F	E	F	E	K	D	G	Y	F	V	V	P	N	A	R	A	T	W	I	A	M	H	R	E	R	.	.	.	.	.
Template Known Secondary structure						.	.	.	.	S		T	T													.	.	.	.	.	.	.	.	.			S						S	S		S											T	T			B	S	S									T	S				.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.																	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.
Template SS confidence
		62	.	.	.					.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.										.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	Q	L	R	E	T	P	A	L	P	S	N	L	T	S	N	T	A	E	A	H	L	L	L	Q	Q	A	I	A	E	G	A	T	S	L	D	T	H	E	V	Q	P	I	L	Q	A	Y	G	M	N	T	L	P	T	W	I	A	S	D	S	T	E	A	V	H	I	A	E	Q	I	G	Y	P	V	A	L	K	L	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	E	T	L	V	K	E	A	K	V	P	T	S	R	Y	M	Y	A	T	T	L	D	E	L	Y	E	A	C	E	K	I	G	Y	P	C	H	T	K	A	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T											S	S													S	S						S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																									124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	D	I	P	H	K	S	E	V	Q	G	V	M	L	Y	L	R	T	A	N	E	V	Q	Q	A	A	N	A	I	F	D	R	V	K	M	A	W	P	Q	A	R	V	H	G	L	L	V	Q	S	M	A	N	R	A	G	A	Q	E	L	R	V	V	V	E	H	D	P	V	F	G	P	L	I	M	L	G	E	G	G
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	.	.	.	.	.	.	.	.	.	S	G	S	Y	F	.	V	K	G	P	E	D	I	P	K	A	W	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	I	I	V	E	E	H	I	D	F	D	V	E	V	T	E	L	A	V	R	H	F	D	E	N	G	E	I	V	T	T	F	P	K	P	V
Template Known Secondary structure			.	.	.	.	.	.	.	.	.						.			S	G	G	G						T		.	.	.	.	.	.	.	.	.	.	.	.	.	.												S													T	T	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		165										.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.															.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		606	.	.	.	610	.	.	.	.	.	.	.	.	.	620			.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		V	E	W	R	P	E	D	Q	A	V	V	A	L	P	P	.	.	L	N	M	N	L	A	R	Y	L	V	I	Q	G	I	K	S	K	K	I	R	A	R	S	A	L	R	P	L	D	V	A	G	L	S	Q	L	L	V	Q	V	S	N	L	I	V	D	C	P	E	I	Q	R	L	D	I	H	P
Query Conservation																	.	.
Alig confidence																	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	H	Y	Q	I	D	G	D	Y	H	A	S	W	Q	P	A	E	I	S	E	K	A	E	R	E	V	Y	R	I	A	K	R	I	T	D	V	L	G	G	L	G	I	F	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	E	M	F	V	K	G	D	K	V	W	A	N	E	V	S	P
Template Known Secondary structure							T	T								S																								S	S						.	.	.	.	.	.	.	.	.	.	.	.	.						T	T									S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.														.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions