Job Description P76594 Confidence 100.00% Date Thu Jan 5 12:24:56 GMT 2012 Rank 1 Aligned Residues 422 % Identity 34% Template c2csuB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:457aa long hypothetical protein; PDBTitle: crystal structure of ph0766 from pyrococcus horikoshii ot3 Resolution 2.20 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	E	A	L	L	R	P	K	S	I	A	V	I	G	A	S	M	K	P	N	R	A	G	Y	L	M	M	R	N	L	L	A	G	G	F	N	G	P	V	L	P	V	T	P	A	W	K	A	V	L	G	V	L	A	W	P	D	I	A	S	L	P	F	T	P	D	L	A	V	L	C	T	N	A	S	R	N	L	A
Query Conservation
Alig confidence																																			.
Template Conservation																																			.
Template Sequence		X	L	D	Y	F	F	N	P	K	G	I	A	V	I	G	A	S	N	D	P	K	K	L	G	Y	E	V	F	K	N	L	K	E	.	Y	K	K	G	K	V	Y	P	V	N	I	K	E	E	E	V	Q	G	V	K	A	Y	K	S	V	K	D	I	P	D	E	I	D	L	A	I	I	V	V	P	K	R	F	V	K	D
Template Known Secondary structure								S		S						T			S		T	T	S										T	T	.			S	S							T	T		S	B	S	S	S	S	B		B	S	S	T	T			S	S			S						S		G	G	G
Template Predicted Secondary structure																																			.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.									.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.
Query Sequence		L	L	E	E	L	G	E	K	G	C	K	T	C	I	I	L	S	A	P	A	S	Q	.	.	.	.	.	.	.	.	H	E	D	L	R	A	C	A	L	R	H	N	M	R	L	L	G	P	N	S	L	G	L	L	A	P	W	Q	G	L	N	A	S	F	S	P	V	P	I	K	R	G	K	L	A	F	I	S	Q	S
Query Conservation																								.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.																																					.
Template Conservation																																																																				.
Template Sequence		T	L	I	Q	C	G	E	K	G	V	K	G	V	V	I	I	T	A	G	F	G	E	T	G	E	E	G	K	R	E	E	K	E	L	V	E	I	A	H	K	Y	G	X	R	I	I	G	P	N	C	V	G	I	X	N	T	H	V	D	L	N	A	T	F	I	T	.	V	A	K	K	G	N	V	A	F	I	S	Q	S
Template Known Secondary structure										T										S	S	G	G	G																		T	T						S	S	S						G	G	G	T					S	S		.						S						S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	V	S	N	T	I	L	D	W	A	Q	Q	R	K	M	G	F	S	Y	F	I	A	L	G	D	S	L	D	I	D	V	D	E	L	L	D	Y	L	A	R	D	S	K	T	S	A	I	L	L	Y	L	E	Q	L	S	D	A	R	R	F	V	S	A	A	R	S	A	S	R	N	K	P	I	L	V	I	K	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	L	G	A	G	I	V	Y	K	T	I	K	E	D	I	G	F	S	K	F	I	S	V	G	N	X	A	D	V	D	F	A	E	L	X	E	Y	L	A	D	T	E	E	D	K	A	I	A	L	Y	I	E	G	V	R	N	G	K	K	F	X	E	V	A	K	R	V	T	K	K	K	P	I	I	A	L	K	A	G
Template Known Secondary structure															T	T				S						T	T		S	S	S											T		S	S									S			S													T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	P	A	A	Q	R	L	L	N	T	T	A	G	M	D	P	A	W	D	A	A	I	Q	R	A	G	L	L	R	V	Q	D	T	H	E	L	F	S	A	V	E	T	L	S	H	M	R	P	L	R	G	D	R	L	M	I	I	S	N	G	A	A	P	A	A	L	A	L	D	A	L	W	S	R	N	G	K	L	A
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Sequence		K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	E	A	A	F	K	Q	S	G	V	L	V	A	N	T	I	D	E	X	L	S	X	A	R	A	F	S	Q	.	P	L	P	R	G	N	K	V	A	I	X	T	N	A	G	G	P	G	V	L	T	A	D	E	L	D	K	R	G	L	K	L	A
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T					S	S										G	G	G	S	.				S	S								S													T	T	T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		239	240																.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.			.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		T	L	S	E	E	T	C	Q	K	L	R	D	A	L	P	E	H	V	A	I	S	N	P	L	D	L	R	D	D	A	S	S	E	H	Y	I	K	T	L	D	I	L	L	H	S	Q	D	F	D	A	L	M	V	I	H	S	P	S	A	A	A	.	.	P	A	T	E	S	A	Q	V	L	I	E	A	V	K	H	H	P
Query Conservation																																																															.	.
Alig confidence																																																															.	.
Template Conservation
Template Sequence		T	L	E	E	K	T	I	E	E	L	R	S	F	L	P	P	X	A	A	V	K	N	P	V	D	X	I	A	S	A	R	G	E	D	Y	Y	R	T	A	K	L	L	L	Q	D	P	N	V	D	X	L	I	A	I	C	V	V	P	T	F	A	G	X	T	L	T	E	H	A	E	G	I	I	R	A	V	K	E	V	N
Template Known Secondary structure															S		T	T				S	S						T	T																	T	T		S											S	T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	K	Y	V	S	L	L	T	N	W	C	G	E	H	S	S	Q	E	A	R	R	L	F	S	E	A	G	L	P	T	Y	R	T	P	E	G	T	I	T	A	F	M	H	M	V	E	Y	R	R	N	Q
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		N	E	.	.	K	P	V	L	A	X	F	X	A	G	Y	V	S	E	K	A	K	E	L	L	E	K	N	G	I	P	T	Y	E	R	P	E	D	V	A	S	A	A	Y	A	L	V	E	Q	A	K	N	V
Template Known Secondary structure				.	.																							T	T					S	S
Template Predicted Secondary structure				.	.
Template SS confidence
		402	.			.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.