Return to main results Retrieve Phyre Job Id

Job DescriptionP76594
Confidence96.68%DateThu Jan 5 12:24:56 GMT 2012
Rank324Aligned Residues105
% Identity19%Templatec1pgqA_
PDB info PDB header:oxidoreductase (choh(d)-nadp+(a))Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase; PDBTitle: crystallographic study of coenzyme, coenzyme analogue and substrate2 binding in 6-phosphogluconate dehydrogenase: implications for nadp3 specificity and the enzyme mechanism
Resolution3.17 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50..... ....60...... ...70......... 80..
Predicted Secondary structure 

















........





...






.
Query SS confidence 








































. . . . . . . .










. . .












.


Query Sequence  IAVIGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVL. . . . . . . . GVLAWPDIASL. . . PFTPDLAVLCTNA. SRN
Query Conservation 






      
  

 

   

 
 





    
 ........
   
 

  
...
   




 


.  
Alig confidence 





....






























........










...












.


Template Conservation 





....
 

  

 

   
  
 



       
   

       
 
  


  
  





 

    
Template Sequence  IALIGL. . . . AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAV
Template Known Secondary structure 

....STT


SSTTTTTTSS

SSB
SS


S
S
Template Predicted Secondary structure 

....


























Template SS confidence 















































































   5....10 .........20.........30.........40.........50.........60.........70.........80
 
   83......90.........100 .........110.........120...
Predicted Secondary structure 



...








Query SS confidence 

















. . .






















Query Sequence  LALLEELGEKGCKTCIIL. . . SAPASQHEDLRACALRHNMRLLG
Query Conservation     
 
    


 


 ...
 

 
   
   
   





Alig confidence 

















...






















Template Conservation 
 

  
   
  
 



 


    
   
  
   

 


Template Sequence  DNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVG
Template Known Secondary structure  TTT

TT

S


TT
Template Predicted Secondary structure 













Template SS confidence 











































   81........90.........100.........110.........120....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions